Herbaspirillum seropedicae SmR1: Hsero_0414
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Entry
Hsero_0414 CDS
T01268
Symbol
fis
Name
(GenBank) factor-for-inversion-stimulation transcription regulator protein
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hse03000
]
Hsero_0414 (fis)
03036 Chromosome and associated proteins [BR:
hse03036
]
Hsero_0414 (fis)
03400 DNA repair and recombination proteins [BR:
hse03400
]
Hsero_0414 (fis)
Transcription factors [BR:
hse03000
]
Prokaryotic type
Helix-turn-helix
Other families
Hsero_0414 (fis)
Chromosome and associated proteins [BR:
hse03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Hsero_0414 (fis)
DNA repair and recombination proteins [BR:
hse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Hsero_0414 (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
HTH_30
Xre-like-HTH
HTH_17
NUMOD1
HTH_psq
HTH_23
HTH_29
DUF1441
Sigma70_r4_2
Phage_NinH
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ADJ61939
UniProt:
D8IX64
LinkDB
All DBs
Position
448801..449034
Genome browser
AA seq
77 aa
AA seq
DB search
MSKESIEDVVKKSLEKYFRDLGEQLPTNVYDMVLATVEKPVFETVMARAEGNQSQAAEIL
GINRNTLRKKLQQHGLL
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaagtattgaggatgtcgtcaagaagagcctggaaaagtatttccgggat
cttggtgagcagcttcccaccaatgtctacgacatggtgctggccaccgtcgaaaagccg
gtcttcgagaccgtgatggcgcgcgccgagggcaaccagtcccaggccgccgaaatcctc
ggcatcaaccgcaacacgctgcgcaagaaattgcagcagcacggcctgctgtag
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