Herbaspirillum seropedicae SmR1: Hsero_0426
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Entry
Hsero_0426 CDS
T01268
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase protein
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Hsero_0426 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hse01007
]
Hsero_0426 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hse03016
]
Hsero_0426 (valS)
Enzymes [BR:
hse01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Hsero_0426 (valS)
Amino acid related enzymes [BR:
hse01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Hsero_0426 (valS)
Transfer RNA biogenesis [BR:
hse03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Hsero_0426 (valS)
Prokaryotic type
Hsero_0426 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
ADJ61951
UniProt:
D8IX76
LinkDB
All DBs
Position
complement(459335..462250)
Genome browser
AA seq
971 aa
AA seq
DB search
MSAKLGIFKAQFHTSARFALSVPYNVGFRKNTRQIMELAKSFEPAEIEKFWREEWEKRGY
FAATTDAEKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYHRMRGYNTAWIPGTDHAG
IATQIVVERQLDAQKVSRHDLGREKFVEKVWEWKEKSGSTITGQMRRMGASTDWAREYFT
MDPKMSKVVTEVFVRLYEQGLIYRGKRLVNWDPVLGTAVSDLEVVSEEEDGSMWHIKYPL
ADGSGHIVVATTRPETMLGDVAVAVDPTDERYAALVGKMIKLPLVGREIPIIKDEYVDKE
FGTGCVKITPAHDFNDYQVGARHNLEMISVFTLKATINENAPEKYQGLDRFEARKQIVAD
LDALGLLEQVKPHKLMVPRGDRTGVVIEPMLTDQWFVAMSKPAPEGTFFPGKSIAETALE
KVSSGEIKFVPENWTNTYNQWLNNIQDWCISRQLWWGHQIPAWYDEDGGIYVARTEEEAR
AQAGGRAVKRDEDVLDTWFSSALVPFSTLGWPEETPDYKLFLPSSVLVTGFDIIFFWVAR
MVMMTTHFTGKVPFDTVYVHGLVRDASGQKMSKSKGNTLDPIDLIDGIGVDELVAKRTVG
LMNPKQAASIEKATRKEFADGIPAFGTDALRFTFASLATLGRNINFDLNRCEGYRNFCNK
LWNATRFVLMNTEGQDCGFDGHEKGVCDKEKLQFSKADRWIVSLLQRTEAEVEKGFADYR
FDNIATAIYKFVWDEYCDWYLEMAKAQIQSGNEAQQRATRRTLLRVLESVLRLAHPVLPF
ITEQLWQSVAPLTDRKPDPAGDSIMRQAYPRPDLEKIDAEAEAWVAQFKAYTDACRNLRG
EMQLAPSLRVPLIVEAADASAVESFLPYLQGLVRLSETTVVAQLPESPAPVAIVGEVKLM
LKVEIDVAAERERLGKEVTRLTAEIAKANGKLSNESFVARAPEAVVAQEKERVANFSATL
EKVKEQLAKLK
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctaaattgggcatcttcaaggcccaatttcacacctctgcgagatttgcccta
tccgtcccttataatgttgggtttcgcaaaaacacacgtcaaatcatggaattagccaag
tcgttcgagcccgccgagattgagaaattctggcgcgaggagtgggaaaagcgcggttac
ttcgccgccaccaccgacgcggagaagccctcgttttccatccagctgccgccgcccaat
gtgaccggcaccctgcacatgggtcacgcgttcaaccagaccatcatggatggcttgaca
cgctaccaccgcatgcgcggctacaacaccgcctggatccccggcaccgaccacgccggt
atcgccacccagatcgtggtggaacgccagctggatgcacagaaggtctcgcgccacgac
ctgggccgtgaaaaattcgtcgagaaggtgtgggagtggaaggaaaaatccggctccacc
atcaccggccagatgcgccgcatgggcgcctccaccgactgggcccgcgaatacttcacg
atggacccgaagatgtccaaggtcgtcaccgaagtcttcgtgcgcctctacgagcagggt
ctgatctatcgcggcaagcgcctggtgaactgggacccggtgctgggcaccgcggtctcc
gacctggaagtggtgtcggaagaagaagacggttccatgtggcacatcaagtacccgctg
gccgatggcagcggccatatcgtggtcgccaccacccgtccggaaaccatgctgggcgac
gtcgccgtggcggtggacccgactgacgaacgctacgccgcgctggtgggcaagatgatc
aagctgccgctggtgggccgcgagatccccatcatcaaggatgaatacgtcgacaaggaa
ttcggcaccggctgcgtgaagatcaccccggcccacgacttcaacgactaccaggtcggc
gcacgccacaacctggaaatgatcagcgtcttcaccttgaaggccactatcaacgagaac
gcgcccgagaagtaccagggcctggaccgcttcgaggcgcgcaagcagatcgtggccgat
ctggacgcgctgggcctgttggaacaggtcaagccgcacaagctgatggtgccgcgtggc
gaccgtaccggcgtggtgatcgagccgatgctgaccgaccaatggttcgtggccatgagc
aagccggcgccggaagggaccttcttccccggcaagtcgattgccgagaccgcactggaa
aaggtttcttcgggcgagatcaagttcgtgcccgagaactggaccaatacctacaaccag
tggctcaacaacatccaggactggtgtatctcgcgccaactgtggtggggccatcagatc
ccggcctggtacgacgaggacggcggcatctacgtggcccgcaccgaagaagaagcccgt
gcgcaagccggcggccgtgccgtcaagcgcgatgaagacgtgctcgatacctggttctcc
tcggcgctggtgcccttctccaccctgggctggccggaagaaacgccggactacaagctg
ttcctgccctcctcggtgctggtgacgggcttcgacatcatcttcttctgggtggcgcgc
atggtcatgatgaccacgcacttcaccggcaaggtgccgttcgacaccgtctacgtccac
ggcctggtgcgcgatgcctcgggccagaagatgtccaagtccaagggcaacaccctggac
ccgatcgacctgatcgatggcatcggcgtggacgagctggtggccaagcgtacggtcggc
ctgatgaatcccaagcaggcggccagcattgagaaggccacccgcaaggaattcgccgat
ggcatcccggccttcggcaccgatgcgctgcgtttcaccttcgcctcgctggcgaccctg
ggccgcaacatcaacttcgacctgaaccgctgcgaaggctatcgcaacttctgcaataag
ctctggaacgccacccgcttcgtgctgatgaataccgaaggccaggactgcggtttcgac
ggccacgagaagggcgtctgcgacaaggaaaagctgcagttctccaaggctgaccgctgg
atcgtgtcgctcttgcagcggaccgaagccgaagtggaaaagggctttgccgactaccgc
ttcgacaacatcgccacggccatctacaagttcgtctgggacgagtactgcgactggtat
ctggaaatggccaaggcccagatccagagcggcaatgaagcgcaacagcgcgccacccgc
cgcaccctcttgcgcgtgctggaaagcgtgctgcgcctggcgcatccggtgctgcccttc
attaccgaacagctgtggcaaagcgtcgcgccgctgaccgatcgcaagcccgatccggcg
ggcgattccatcatgcgccaggcctatccgcgtccggacctggagaagatcgatgccgaa
gccgaagcctgggtcgcccagttcaaggcctacaccgacgcctgccgcaacctgcgcggc
gagatgcaactggcgccgtcgctgcgcgtgccgctgatcgtggaagccgccgatgcgtcg
gccgtggaatccttcctgccctacctgcaaggcctggtgcgcctgtcggaaaccacggtg
gtggcgcagttgccggagtcgccggcgccggtggccatcgtcggcgaagtcaagctgatg
ctgaaggtggaaatcgacgtggccgccgagcgcgaacgcctgggcaaggaagtcacccgc
ctgaccgccgagatcgccaaggccaatggcaagctgtccaacgaaagcttcgtggcccgt
gcgcccgaggcggtggtggcgcaggagaaggaacgcgttgccaacttcagcgctacgctg
gaaaaggtgaaggaacaactggccaagctaaagtaa
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