KEGG   Herbaspirillum seropedicae SmR1: Hsero_0601
Entry
Hsero_0601        CDS       T01268                                 
Symbol
potA
Name
(GenBank) ABC-type spermidine/putrescine transport systems, ATPase component protein
  KO
K02052  putative spermidine/putrescine transport system ATP-binding protein
Organism
hse  Herbaspirillum seropedicae SmR1
Pathway
hse02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hse00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Hsero_0601 (potA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hse02000]
    Hsero_0601 (potA)
Transporters [BR:hse02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    Hsero_0601 (potA)
SSDB
Motif
Pfam: ABC_tran AAA_21 TOBE_2 SMC_N Rad17 ORC-CDC6-like AAA AAA_22 CysA_C_terminal ABC_ATPase nSTAND_NTPase5 AAA_5 AAA_28 AAA_16 RsgA_GTPase nSTAND3 SbcC_Walker_B Cast NACHT ATPase_2 AAA_19 AAA_14
Other DBs
NCBI-ProteinID: ADJ62120
UniProt: D8IYG0
LinkDB
Position
659480..660565
AA seq 361 aa
MKSHQEAVSIRLSQCAKSFANGTRALQPLDLQIHPGETLVLLGPSGCGKTTTLRMIAGLE
FPDEGGRVLFGEEDVTMLPIEKRGVGMVFQNYALFPNMSVGENIAYGMKIRKIAAGERAE
RVERLLEMVHLQGLSHRRVDQLSGGQKQRVALARALAMEPRVLLLDEPLTALDAKLREAV
RSDLNKLLRSLGITAIYVTHDQGEAMALGDRIVVMERGKISQIGTPQEIYYHPANDFVAE
FIGAMNRVDGIVAGDRLQLPTGTLPLPPDAVAGQPAQALFRPEDVEVIDITEADAHCLRG
KLINTFFLGDRTRFEIEIGAERPVIAETSRRGWWEAGQQIAIRVPATALVTMAPRAAKET
A
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaagtcccatcaagaagccgtctctatccgtctctcccagtgcgccaagtcctttgcc
aatggcacgcgcgcgctgcagccgctggacctgcagatccatccgggcgaaaccctggtc
ctgttggggccttccggctgcggcaagaccaccacgctgcgcatgatcgctggcctggag
tttcctgacgagggcggccgcgtgctgttcggcgaggaagacgtgaccatgctacccatc
gagaaacgcggggtgggcatggtgttccagaactacgcgctgtttcccaacatgagcgtg
ggcgagaacatcgcctatggcatgaagatccgcaagatcgccgccggcgagcgcgccgag
cgggtcgagcgcctgctggagatggtgcatctgcaaggcctgtcgcaccgccgcgtggac
cagctctcgggcggccagaagcagcgtgtggcgctggcgcgcgcgctggccatggagccg
cgcgtgctgctgctggatgaaccgctcacggcgctggacgccaagctgcgcgaagcggtg
cgcagcgatctcaacaagctcttgcgcagcctcggcattactgccatctacgtcacccat
gaccagggcgaggcgatggccctgggcgaccgcatcgtggtcatggagcgcggcaagatc
tcgcagatcggcacgccccaggagatctactatcatcccgccaatgacttcgtggccgag
ttcatcggcgcgatgaaccgggtcgatggtatcgtggcgggagaccgcctgcagttgcct
accggtaccttgccgctgccgccggatgcggtggcgggacagccggcgcaggcgctgttc
cggcctgaagatgtggaggtgatcgatatcaccgaagccgatgcgcattgcctgcgcggc
aagctgatcaacacgtttttcctgggtgaccgcacccgctttgaaatcgagattggcgca
gagcgcccggtgatcgccgagaccagccgccgcggctggtgggaagccgggcagcagatc
gccatccgcgtgccggccacggcgctggtgaccatggcgccgcgcgccgcgaaggagacc
gcatga

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