Herbaspirillum seropedicae SmR1: Hsero_0727
Help
Entry
Hsero_0727 CDS
T01268
Name
(GenBank) ABC-type sugar transport system, periplasmic component protein
KO
K10439
ribose transport system substrate-binding protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
hse02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_0727
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Hsero_0727
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_0727
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Hsero_0727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ADJ62246
UniProt:
D8IZC6
LinkDB
All DBs
Position
793484..794434
Genome browser
AA seq
316 aa
AA seq
DB search
MIKNTIAIACSTLLLAAAAQPAMAADKPLKSVGVTVGDLANPFFVAIAKGAESGAHKINP
DAKVTVVSSKYDLNTQVGQIENFIANKVDLIVLNAADSKGVGPAVKKAQKAGIVVVAVDV
AAAGADVTVMSDNTMAGAESCKFLAEKLQGKGNVVIVNGPPVSAVMDRVTGCKAEFKKSP
GIKILSDNQNAGGSRDGGMTTMSNLLAAQPKIDAVFAINDPTAIGAELAIRQAKRSDIKW
ISGVDGAPDAERALKDSKSLFAASPAQDPYGMAAESVAIGYAVMNGRAPQQKVKLLPVKL
ITRDNVADYQGWVPAK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaacaccatcgccatcgcctgttccaccctgttgctggcggccgccgcgcag
cccgccatggccgctgacaagccgctcaaatcggtgggcgtcaccgtgggcgacctggcc
aatcccttcttcgtggccatcgccaagggcgccgagagcggcgcgcacaagatcaacccg
gacgccaaggtcaccgtggtctcgtccaagtacgacctcaacacccaggtcggccagatc
gagaatttcatcgccaacaaggttgacctgatcgtgctcaacgccgccgattccaagggc
gtcggcccggccgtgaagaaggcgcagaaggccggcatcgtcgtggtggccgtggacgtg
gccgctgcgggcgcggacgtgacggtgatgtcggataacaccatggccggggccgagtcg
tgcaagttcctggccgagaagctgcagggcaagggcaatgtggtcatcgtcaatggtccg
ccggtgtccgcagtgatggatcgggtgaccggctgcaaggccgagttcaagaagtcgccc
ggcatcaagatcctctccgacaaccagaacgccggcggcagccgtgatggcggcatgacc
accatgtccaacctgctggcggcccagcccaagatcgatgcggtcttcgccatcaacgat
cccaccgccattggcgccgaactggccatccgccaggccaagcgcagcgacatcaagtgg
atcagcggcgtggatggcgcgcccgacgccgagcgcgcgctcaaggacagcaagtcgctg
tttgccgcctcacccgcgcaggacccctacggcatggctgccgagagcgtcgccatcggc
tacgccgtgatgaacggccgcgccccacagcagaaggtcaagctgttgccggtcaagctg
atcacccgcgacaacgtggccgactaccagggctgggtgccggccaagtaa
DBGET
integrated database retrieval system
