Herbaspirillum seropedicae SmR1: Hsero_0736 Help Entry Hsero_0736        CDS       T01268                                  Name (GenBank) VGR-related protein   KO K11904   type VI secretion system secreted protein VgrG Organism hse  Herbaspirillum seropedicae SmR1 Pathway hse03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:hse00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     Hsero_0736  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:hse02044]     Hsero_0736 Secretion system [BR:hse02044]  Type VI secretion system   Imp/Vas secretion system core components    Hsero_0736 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Phage_GPD DUF2345 T6SS_Vgr Phage_base_V Sarcoglycan_1 DUF6484 Motif Other DBs NCBI-ProteinID:  ADJ62255 UniProt:  D8IZD5 LinkDB All DBs Position complement(803061..805925) Genome browser AA seq 954 aa AA seqDB search MNLPLPDSLTAAVTELFGTGLSQNARLITMTTAQSAGLPETLAVERFEGEESVNDNFRFD IDALSISTDLDLKQFIGAEISLRLLQADGGTRAWHGYCTQASWLGADGGLARYRLRLESF LAFLDRRHDSFLFQDMTVTDIAAAVLKEYPQANFSLEVTQTLAKRDICTQYRETDYAFLR RILASEGLNFRFEHEQDDATQQHDQSQPHARHKLVIFDRNAKAPALPGGDEYIRFHRVAA MEASDAITDFAAVRSVRPNGVALASWHPEKLSSPSHEEGSTLDAGELPSLPVYDGTGQQD FADQDAAAAHAQLMLQALEMQNKRFEGAGAARQLAAGARFTLLQHERYPEGENAFKVVSV RHAARNNVSANITRILAPAAGALFGGSAAAERDDDLQAGTYRNSFTAIRDSVPMVPAAIA ERLKPTARGTQTALVTGAADAAVTTDRNHRVKVQFHWQRGKSPNPGGLRETGNLDDKDGN ANGNDSSGTWIRVAEAQSGPNWGSQFIPRVGSEVLVDFIEGDIDRPVVVAQLYNGSDAPP FPAGADSGINHAGSISGWHSTAHDGSGFNQWVVDDTQSQLRMRLASSTAKSQLNLGHLVE QADTGAQRGSYRGQGFELRSDAWGVVRGGEGLLLSTTARPLNGASVTGTQMDAAGAIAQL KGAKSLAQTMSDSATQQQALSSTQALQAKTDFLALIDPSDQGKHPASVNGQDALKSDGST RNTDAAQPVEKFAKAAVLMDSPSSINWTSNASTLLYAAENLQWTTQGDVHWSAADTASAA AGKAASFYSHDGGIQAFAANGPVSLQAHTDALEILADKDVTVTSVNDSIEIKARQKIVLQ AGQASVTLEGGNITFACPGTFSVKGATHAFPGGASVSPDLMALPDTKYKLFDEAFVVKDP NGTPLSDIPYRIKSSAGDQLATTAKDGMSERVSTEASENVEFAMEWFKVVPAKT NT seq 2865 nt NT seq  +upstreamnt  +downstreamnt atgaacctgccactgcccgattcgctcaccgccgccgtcactgaattgtttggtaccggc ctgtcgcagaacgcccgcctcatcaccatgaccacggcgcagtccgcaggcctgcccgag acgctggcggtagaacgcttcgagggcgaggaaagcgtcaatgacaacttccgcttcgac atcgatgcgctgtccatctccaccgacctcgacctgaaacagttcatcggcgccgagatc agcctgcggctgttgcaggccgatggcggcacgcgcgcctggcatggctactgcacccag gcctcgtggctgggcgctgatggcgggctggcgcgctaccggctgcgcttggaatccttc ctggccttcctggatcgccgccatgacagcttcctgttccaggacatgaccgtcaccgat attgcagcagccgtgctcaaggaatacccgcaggccaatttctcgctggaggtgacgcag acgctggccaagcgcgacatctgcacgcagtatcgcgagaccgactacgccttcctgcgc cgtatcctggcctccgaaggcctgaacttccgcttcgagcacgaacaggacgacgccacg cagcagcacgaccagtcgcagccgcatgcccgccacaagctggtgatcttcgaccgcaac gccaaggcgccggcactgcccggtggcgatgagtacatccgtttccatcgggtggcggcc atggaagccagcgatgccatcaccgactttgccgccgtgcgcagcgtgcgccccaacggc gtggcgctggccagctggcatccggagaagctctcgtctccctcgcatgaggagggctcg accctggatgccggagaactcccgtccctgccagtctacgacggcaccggtcagcaggac ttcgccgaccaggacgctgccgccgcccatgcccagctgatgctgcaggcgctggagatg cagaacaagcgtttcgagggcgcaggcgcggcgcgccaactggcggcaggagcgcgcttc acgctgctgcagcacgagcgctatcccgagggtgagaacgccttcaaggtcgtgagcgtg cgccatgcggcgcgcaacaatgtcagcgccaacatcacccgcatcctcgcaccggcggca ggcgcgctctttggcggcagcgctgcggccgagcgcgatgacgacctgcaggccgggacc taccgcaacagcttcacggccatccgcgacagcgtacccatggtgccggcggccatcgcc gagcgcctcaagcccactgcccgcggcacgcagacggcgctggtcacgggcgcggccgat gcggcggtcacgaccgaccgcaaccaccgcgtgaaggtgcaattccactggcagcgcggc aagtcgcccaatcctggcgggctcagggagaccggcaatctggacgacaaggacggcaac gccaacggcaacgacagttccggcacctggatccgcgtggccgaggcgcagtccggaccc aactggggcagccagttcatcccgcgcgtaggcagcgaggtgctggtcgatttcatcgaa ggcgatatcgatcgtccggtggtcgtggcccagctctacaatggcagcgatgcgccgccc ttcccggccggcgctgattccggcatcaaccatgcaggcagcatctctggctggcacagc accgcccatgacggcagcggattcaaccagtgggtagtggacgatacccagtcgcagttg cgcatgcgccttgcctccagcacggccaagtcacagttgaacctggggcacctggtggaa caggccgataccggcgcccagcgcggcagctaccggggccagggtttcgaattgcgcagc gatgcctggggcgtggtgcgcggcggcgaaggcctgctgctctccaccaccgcgcgccca ctcaacggcgccagcgtaactggcacgcagatggatgcggctggcgccattgcgcagctc aagggagcgaagtcgctggcccagacgatgagcgactctgccacgcagcagcaagccctc agcagcacccaggcgctgcaggccaagaccgatttcctggcgctgatcgatcccagtgat cagggcaagcatccggccagcgtgaatggccaggacgcgctcaagtccgacggcagcaca cgcaataccgacgccgcgcagccggtggaaaaattcgccaaggctgccgtgctgatggat tccccctccagcatcaactggaccagtaacgcctccaccttgctgtatgccgcagagaac ctgcaatggaccacccagggcgacgtccactggagcgccgccgacacggccagcgccgcc gccggcaaagcggccagcttctacagccatgatggcggcatccaggccttcgccgccaat ggaccggtttcgctgcaggcccataccgacgccctggagatcctggcggacaaggatgtg actgttaccagcgtcaacgacagcatcgagatcaaggcgcgtcagaagatcgtgttgcag gcaggacaggcttcggtgacgctggagggcgggaatattacctttgcttgtccggggacg ttttcggtgaagggggcgacgcatgcgtttccggggggagcgagcgtctctccggatctg atggcgctgccagacaccaagtacaagctcttcgacgaagccttcgtggtgaaggacccc aatgggactccactctctgacatcccttatcggatcaagagttcagccggagaccagctg gcgaccaccgccaaggacggcatgagcgagcgcgttagcacggaagccagcgagaacgtg gagttcgccatggagtggttcaaggtcgtgccggccaaaacttga

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