Herbaspirillum seropedicae SmR1: Hsero_0747 Help Entry Hsero_0747        CDS       T01268                                  Symbol clpB Name (GenBank) ClpA/B-type chaperone protein   KO K11907   type VI secretion system protein VasG Organism hse  Herbaspirillum seropedicae SmR1 Pathway hse03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:hse00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     Hsero_0747 (clpB)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:hse02044]     Hsero_0747 (clpB) Secretion system [BR:hse02044]  Type VI secretion system   Imp/Vas secretion system core components    Hsero_0747 (clpB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 Clp_N AAA_22 nSTAND3 AAA_7 Sigma54_activat NACHT ABC_tran_CTD AAA_29 T2SSE TniB Zeta_toxin SRP54 DUF815 SLFN-g3_helicase TraV DUF5947 Motif Other DBs NCBI-ProteinID:  ADJ62266 UniProt:  D8IZE6 LinkDB All DBs Position 816027..818708 Genome browser AA seq 893 aa AA seqDB search MGINLKSLISKLNDSSRLATERAASLCMARGQYEVDLEHLFLALLENPQTDFSLIVRRSG ISPDSLQADLEHEISQFKNGNTRTPVLSSHLQTLFEHGWLIASLDGERPSIRSGHLLLAL LTQTELAQLAYRGSKLFARFKVDELKHDLAKLTEGSVEAPALASASASAAADGQADEQQG GDPVGEMRAGGRTPALDQYTTNLTQRAREGKIDPVVGRDGEIRQAVDILLRRRQNNPILT GEAGVGKTAVVEGLALRIAQDDVPQALQGVEIHTLDMGLLQAGASVKGEFENRLKGVIDE VKKSPHPIILFIDEAHTMIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEK DAALARRFQVIKVEEPTEEVACAMLRAMAPLMEKHFGVRVYDEAITEAVRLSHRYISGRQ LPDKAISVLDTACAKVALGQNATPARLEGVTRRLERLAAEIAALERETRSGASHATRLGE LQAQHAQAIAEQTELQQRWEQERELNGRIQAARAALEEANQESASSQDSAAARSELQQLL AQLKEHQGETPMVPVQVDGHVVAEIVAGWTGIPLGKMVKDEIKTVLGLDALLKERVLGQP QATAAVAQRVRTSRANLDDPGKPKGVFLFVGPSGVGKTETALALADVLYGGERKLITINM SEYQEAHTVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLELFFQVF DKGVMDDGEGREIDFKNTIIILTSNVASSQLMQACLNKSAAELPTPDELDVLIRPQLVKA FKPAFLGRLKVIPYYPISDEVLEQIIKLKLGRIANRIAENHKAEFSYDKALVEAVLARCT EVDSGARNVDNILNGSLLPEIAESVLARMAEGQGISRIKVSAGKKGDFKYTIQ NT seq 2682 nt NT seq  +upstreamnt  +downstreamnt atgggcatcaacctcaaatcgctgatcagcaagctcaacgacagcagccgcctcgccacc gaacgtgctgccagcctgtgcatggcgcgcggccagtatgaagtggacctggagcacctg ttcctggcgctgctggaaaacccgcagaccgacttcagcctgatcgtgcgccgcagcggc atcagccccgacagcctgcaggccgatctggaacacgagatcagccagttcaagaacggc aacacccgcaccccggtgctctcgtcccatctgcagacgctgttcgaacatggctggctg atcgcctcgctcgatggcgagcgccccagcatccgcagcggtcatctgctgctggcgctg ctgacccagaccgagctggcgcaactggcctatcgcggctccaaactgtttgcccgcttc aaggtggatgaactcaagcacgacctggccaagctgaccgaaggctcggtggaagccccc gccttggcatcggcatcggcatcggcagccgcagatgggcaggcagacgagcagcagggc ggcgacccggtcggcgaaatgcgcgctggcggcaggacacccgcgctggaccagtacacc accaacctcacccaacgcgcccgcgagggcaagatcgacccggtcgtcggccgcgatggc gagatccgccaggccgtcgatatcctgctgcggcgccgccagaacaaccccatcctcacc ggtgaagccggcgtgggcaagaccgccgtggtcgaagggctggcgctgcgcatcgcccag gatgatgtgccgcaggccctgcagggcgtggagatccacacgctggacatgggcctgctg caggccggcgccagcgtcaagggcgagttcgagaaccgcctcaagggcgtcatcgacgag gtcaagaagagcccgcatcccatcatcctcttcatcgacgaagcccataccatgatcggc gccggcggccaggccggccagaacgacgccgccaacctgctcaagccagcgctggcgcgg ggcgagctacgcaccatcgccgccaccacctggagcgagtacaagaagtacttcgagaag gacgccgccctggcccgccgcttccaggtcatcaaggtcgaggaaccgaccgaagaagtc gcctgcgccatgctgcgcgccatggccccgctgatggaaaagcacttcggcgtgcgcgtc tacgacgaagccatcaccgaagccgtgcgcctgtcgcatcgctatatcagcggccgccag ctgcccgacaaggccatcagcgtgctcgacaccgcctgcgccaaggtggccctgggccag aacgccacccccgcgcgcctggaaggcgtgacccgtcgcctggaacggctcgccgccgag atcgccgcactggagcgcgaaacccgcagcggcgcttcccacgccacccgtctgggcgaa ctgcaggcccagcacgcgcaggccatcgccgagcagaccgagctgcagcaacgctgggag caggagcgcgaactcaatggccgcatccaggccgcccgcgccgcgctggaagaggccaac caggaaagcgccagcagtcaggacagcgcggccgcccgcagcgagttgcagcagctgctg gcccagttgaaggagcatcagggcgaaacgccgatggtgccagtgcaggtcgatggccat gtggtggccgagatcgtggctggctggaccggcatcccgctgggcaagatggtcaaggac gagatcaagaccgtgctgggactggatgcgctgctcaaggagcgcgtgctcggccagccg caggccaccgccgccgtcgcgcagcgcgtgcgcacctcgcgcgccaacctcgatgatccc ggcaagcccaagggcgtgttcctgttcgtcggcccctccggcgtgggcaagaccgagacc gccctggccctggccgacgtgctctacggcggcgaacgcaagctcatcaccatcaacatg agcgagtaccaggaagcccacaccgtctcgggcctcaaaggctcgcccccaggctacgtc ggctacggcgaaggcggcgtgctcaccgaagcggtgcgacgcaatccctacagcgtggtg ctgctcgacgaagtcgagaaagcccacccggacgtgctggagctgttcttccaggtcttc gacaagggcgtgatggacgatggcgaagggcgcgagatcgacttcaagaacaccatcatc atcctcaccagcaacgtcgcttcctcgcagctgatgcaggcctgcctgaacaagagcgcc gccgagctgccaacgccggacgaactcgacgtgctgatccgcccgcaactggtcaaggcc ttcaagccggctttcctcggtcgcctgaaggtcattccctactatccgatcagcgacgag gtgctcgagcagatcatcaagctcaagctcggacgcatcgccaatcgcatcgccgagaac cacaaggccgagttcagctatgacaaggcgctggtcgaagccgtgctggcgcgctgcacc gaagtggattcaggcgcgcgcaatgtcgacaacatcctcaacggcagcctgctgcccgag attgccgagagcgtgctggcgcgcatggccgaaggccagggcatcagccgcatcaaggtg tcggccggcaagaagggcgacttcaaatacaccatccagtaa

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