Herbaspirillum seropedicae SmR1: Hsero_0756
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Entry
Hsero_0756 CDS
T01268
Name
(GenBank) outer membrane protein and related peptidoglycan-associated (lipo)proteins
KO
K03286
OmpA-OmpF porin, OOP family
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_0756
Transporters [BR:
hse02000
]
Other transporters
Pores ion channels [TC:
1
]
Hsero_0756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
BON_like
Ribosomal_S6e
Motif
Other DBs
NCBI-ProteinID:
ADJ62275
UniProt:
D8IZF5
LinkDB
All DBs
Position
complement(831617..832432)
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AA seq
271 aa
AA seq
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MDTSFFPSLRRPACVFAAALLCNLANVALAQNAAPPVATPAPGQVLVTGTVPDEASKAAA
LARLREVYGADRVVDQIAVGQVVLPANWNNHVQSLISPNLKAVSRGQLKIDGTTVSITGE
VANEAQRQQIASDMASSLNSSYTVNNGLRVSTSEQGLLDNALANRVVSFESGQATLTPEG
KRILDEIAATMLKLKGRHVEIIGNTDNEGLRASNISLSLARADAVKAYLGAKGVDESLLS
TSGQGPDRPVASNATAEGRAKNRRIEFRIAK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
ttggatacgtccttcttcccttccctgcgccggcccgcctgcgtattcgccgcggccctg
ctctgcaacctcgccaacgtcgcgctggcgcagaacgccgcgccccccgtggccacgccc
gcccccggccaggtactggtcaccggtaccgtccctgacgaagccagcaaggccgccgcc
ctggcccgcctgcgcgaagtctatggcgccgaccgcgtggtcgaccagatcgccgtgggc
caggtagtgctgccggccaactggaacaaccatgtgcagagcctgatctcgcccaatctg
aaagcggtcagccgcggccagctaaagatcgacggcaccaccgtctccatcaccggcgag
gtcgccaacgaagcccagcgccagcagatcgccagcgacatggccagcagcctcaactcg
tcctataccgtcaacaacgggctgcgcgtgtccacctccgagcagggcctgctggataac
gccctggccaatcgcgtcgtctccttcgaaagcggacaggccaccctcacccccgagggc
aagcgcatcctcgacgagatcgccgccaccatgctcaagctcaagggccgtcatgtggaa
atcatcggcaacaccgacaacgaaggcctgcgcgccagcaatatctcgctgtcgctggcc
cgtgccgatgcagtcaaggcctacctgggcgccaagggcgtcgacgagagcctgctgagc
acctctggccaaggcccggatcgcccggtggcctcgaacgccacggcagaggggcgcgca
aagaaccgccgcattgaattccgtatcgccaagtaa
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