KEGG   Herbaspirillum seropedicae SmR1: Hsero_0789
Entry
Hsero_0789        CDS       T01268                                 
Symbol
hrpQ
Name
(GenBank) type III secretion HrpQ protein
  KO
K03220  type III secretion protein D
Organism
hse  Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:hse00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hse02044]
    Hsero_0789 (hrpQ)
Secretion system [BR:hse02044]
 Type III secretion system
  Type III secretion core apparatus
   Hsero_0789 (hrpQ)
SSDB
Motif
Pfam: Yop-YscD_cpl Yop-YscD_ppl_3rd FHA Y4YQ_C HutF_N
Other DBs
NCBI-ProteinID: ADJ62308
UniProt: D8IZI8
LinkDB
Position
868739..869773
AA seq 344 aa
MQELRILNGYHRGATLPLADSGERILGAEEDADVVLADPGIAGQHARLALTPEGWTLTAM
DGCLRRADSNRPESALQLAFGELARADRIWLTVVDQDAPWTDPPPEPVDTPHSSGDQEGP
PADQETAYSDALPLPATDEDEPQQQAPAPTPDDATAAEPALARRGRGYRMVLLPFFMATA
LTGAAAYALSSHPAPADEQARARAEELKRLAALPRKLPAAELEAALRKRLAEVDLLSRMT
LDLREGAWTLRGAMGEDDAERLQRMLRDFAKAYVIDFPIDVKIGSPESMLPFRIVQVLNG
SDPSIVTDDGRRLYVGDEYRGVRLAAVAGNQIRFTGKQALNVSW
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgcaagaactgcgcattctcaacggctatcaccgtggcgcgacattgccgctggccgat
agcggcgaacgtattctgggcgcagaggaagacgccgacgtggtgctggccgatcccggc
attgccgggcagcacgccaggcttgcgttgacgcccgagggctggaccctgaccgcgatg
gacggctgcctgcgccgggccgacagcaaccggccggagtcggcattgcaactggccttt
ggcgagctggcgcgcgccgaccgcatctggttgaccgtggtcgatcaggatgcgccatgg
accgacccgccgccggagccggtcgatacgccgcactcctctggcgaccaggagggccca
ccagcggaccaggagaccgcgtacagcgacgcactgccgctgcccgctacggatgaggac
gagccgcagcagcaggcgccagccccgacgccggacgatgccaccgccgccgagccagcc
ctggcgcggcgcggccgcggctatcgcatggtgctgctgccgttcttcatggccaccgcg
ctgaccggtgcggccgcctatgcgctgagcagccatccggcgccggccgatgagcaggcc
cgggcgcgcgcggaagagctcaagcggctggccgcgctgccgcgcaagctgcccgcggcc
gagctggaagccgcgctgcgcaagcgcctggccgaggtcgatctgctctcccggatgacg
ctggacctgcgcgagggcgcatggaccctgcgcggcgccatgggcgaggacgacgccgag
cggctgcaacgcatgctgcgcgattttgccaaggcctacgtcatcgactttcccatcgac
gtcaagatcggcagcccggaatcgatgctgcccttccgcatcgtccaggtgctcaacggc
agcgatcccagcatcgtcaccgatgacggccgccgcctctacgtcggcgacgagtatcgc
ggcgtgcgcctggcggcggtggcgggcaaccagatcagatttaccggcaagcaagccttg
aacgtgtcatggtga

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