Herbaspirillum seropedicae SmR1: Hsero_0840
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Entry
Hsero_0840 CDS
T01268
Symbol
fdx
Name
(GenBank) ferredoxin [4Fe-4S]-type protein
KO
K18979
epoxyqueuosine reductase [EC:
1.17.99.6
]
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hse03016
]
Hsero_0840 (fdx)
Enzymes [BR:
hse01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.99 With unknown physiological acceptors
1.17.99.6 epoxyqueuosine reductase
Hsero_0840 (fdx)
Transfer RNA biogenesis [BR:
hse03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Hsero_0840 (fdx)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_16
QueG_DUF1730
Fer4_7
Fer4_10
Fer4
Fer4_6
Fer4_9
Motif
Other DBs
NCBI-ProteinID:
ADJ62358
UniProt:
D8J021
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All DBs
Position
927047..928090
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AA seq
347 aa
AA seq
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MGFADVRIADVDLSHREAGFQAWLDKGYHGEMDYMASHGLKRARPAELVPGTVRVVSVRM
PYLPKASGPAEPDWRAREEARSADPGGAQVSIYARGRDYHKVLRARLQQLATRIEGRIGP
FGYRVFTDSAPVMEVALAEKAGLGWRGKHTLLLHREAGSMFFLGEMLTDLPLPVDDPVTP
HCGQCSACITACPTGAIVAPYELDARRCISYLTIELKGSIPSELRPLIGNRIYGCDDCQL
YCPWNKFAQRASLPDFDVRHGLDSASLVGLFGWSEEEFLKNTEGSAIRRIGHERWLRNLA
VGLGNAADAASHRGDAAIVAALRARLAHPSALVVEHVQWALARHGVS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
ctgggttttgccgacgtgcgtattgccgatgtggacctgtcgcaccgcgaggccggcttc
caggcctggctggacaagggctaccacggcgagatggattatatggcaagccacggcctg
aaacgggcgcgtccggccgaactggtgccgggcacggtgcgggtggtcagcgtgcgcatg
ccctatctgcccaaggcgagtggcccggccgagcctgactggcgcgcccgcgaagaagcg
cgcagcgccgatccgggtggggcccaggtctcgatctatgcccgtggccgcgattatcac
aaggtcttgcgcgcccgcctgcagcagctggcgacgcgtatcgaaggccgtatcggtccc
ttcggctaccgtgtcttcaccgattcggcgccggtcatggaagtggcgctggccgaaaag
gccggcctgggctggcgcggcaagcatacgctcttgctgcaccgggaggccggttcgatg
ttcttcctgggcgagatgctgaccgacctgccgctgccggtggatgatcccgtcaccccg
cattgcggccagtgcagcgcctgcatcacggcctgtccgactggcgccatcgtcgcgcct
tacgagctggatgcgcgacgctgcatctcctacctcaccatcgaactcaagggcagcatc
cccagcgagctgcgcccgctgatcggcaatcgcatctatggctgcgacgattgccagttg
tattgcccctggaacaagtttgcccagcgcgccagcctgcctgacttcgacgtacgccac
ggcctcgatagcgccagcctggtcgggctgttcggctggagcgaagaagaattcctgaag
aacaccgaaggcagcgccatccgccgcatcggccatgagcgctggctgcgcaacctcgct
gtggggctgggcaatgccgccgatgcagcttcgcaccggggcgacgccgccatcgtggcg
gccttgcgggcgcgtcttgcgcatccctcggcgctggtggtcgagcatgtgcaatgggcg
ctggcgcgccacggggtcagctga
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