Herbaspirillum seropedicae SmR1: Hsero_0842
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Entry
Hsero_0842 CDS
T01268
Symbol
dctR
Name
(GenBank) C4-dicarboxylate transport transcription regulator protein
KO
K11712
two-component system, LuxR family, response regulator DctR
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hsero_0842 (dctR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hse02022
]
Hsero_0842 (dctR)
Two-component system [BR:
hse02022
]
LuxR family
DctS-DctR (C4-dicarboxylate transport)
Hsero_0842 (dctR)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_29
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ADJ62360
UniProt:
D8J023
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Position
complement(929009..929599)
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AA seq
196 aa
AA seq
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MLHIVDDEEIIRDSLAWLARSRNIAATAYDSGPTLLAALAASPGIDAEGECLLLDVRMPG
TSGVALFNDLKTKGLLHRRPVIFLTGHGDVPMAVDMLKNGAFDFFEKPFNDNQLMDRVLE
ALASSRAGGAEDAVQSRLAALSVREREVLDLILAGKMNKVIADELGISMRTVEVHRAHIF
DKMNVKTAVELARLLK
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacatagttgacgacgaagagatcatccgcgattcgctggcctggctggcgcgt
tcgcgcaacatcgccgccaccgcctacgacagcggcccgaccctgctggcggcgctggcc
gccagtcccggcatcgatgccgagggcgaatgcctgctgctggatgtgcgcatgcccggc
accagcggggtggcgctgttcaacgacctcaagaccaagggcctgttgcaccgtcgcccg
gtcatcttcctcaccggccacggcgatgtccccatggcggtggacatgctcaagaacggc
gctttcgatttcttcgaaaagcccttcaatgacaaccagttgatggaccgtgtactggaa
gcgctggccagctcgcgcgccggcggcgccgaggatgcggtgcaaagccgcctggcggcg
ctctccgtgcgggagcgcgaggtgctggacctgatcctggccggcaagatgaacaaggtc
atcgccgatgagctcggcatcagtatgcgcaccgtggaagtccatcgcgcccatatcttc
gacaagatgaacgtcaagaccgccgtcgaactggcgcgtctgctcaagtaa
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