Herbaspirillum seropedicae SmR1: Hsero_0849
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Entry
Hsero_0849 CDS
T01268
Symbol
xerD
Name
(GenBank) site specific integrase/recombinase protein
KO
K04763
integrase/recombinase XerD
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hse03036
]
Hsero_0849 (xerD)
Chromosome and associated proteins [BR:
hse03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Hsero_0849 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
ADJ62367
UniProt:
D8J030
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All DBs
Position
936894..937817
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AA seq
307 aa
AA seq
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MGRTTPKIEAPAVSREAIDEFCDSLWLEDGLSKNTLEAYRRDMTRYAHWLYQERAKALYE
TQAEDLNAYFAARHDQTKPSSSNRRLAVLKRFFQLALRQHHVAADPCLKLRSARQPQRFP
KTLSEGQVEALLAAPDVSTPLGLRDRAMIELMYASGLRVSELVLLKSIEVGMNEGVLRVT
GKGSKTRLVPFGEEAGSWLMRYLAEARAQILQGQVDDALFVTARGGPMTRQMFWTLIKKY
ALQAGVTARLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKQLH
AAHHPRG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcaccacaccaaagatcgaggctccggccgtgagccgtgaagccatcgacgaa
ttctgcgacagcctgtggctggaagatggcttgtccaagaacacgctggaggcctaccgg
cgcgacatgacccggtatgcccactggctctaccaggagcgcgccaaggccctgtacgag
acgcaggccgaggacctcaacgcctactttgcggcgcgccacgatcagaccaagcccagc
tcttccaaccgccgcctggcggtgttgaaacggttcttccagctggcgctgcgccagcat
cacgtggccgccgatccctgcctgaagctgcgctcggcacgccagccgcagcgttttccc
aagaccctctcggaaggccaggtcgaggccttgctggccgcgccggatgtgtccaccccg
ctgggattgcgcgaccgcgccatgatcgagctgatgtacgccagcgggctgcgggtctcg
gaactggtgttgttgaagagtatcgaggtgggcatgaacgagggcgtcctgcgcgtgacc
ggcaagggcagcaagacccgcctggtgccgtttggcgaggaagccggcagctggctcatg
cgctacctggccgaggcgagggcgcagatcctgcaggggcaggtcgacgatgccttgttc
gtgaccgcccgcggtggcccgatgacgcgccagatgttctggaccctgatcaagaaatat
gcgctgcaggcgggcgtgacggcgcgcctgtcgccgcataccttgcgccacgcctttgcc
acccacctgctcaaccatggggccgacctgcgcgtggtgcagctgctgctgggtcatgcc
gacatctccaccacccagatctatacccacgtcgcccgtgagcgcctcaagcaactgcat
gccgcacatcacccccgcggctga
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