Herbaspirillum seropedicae SmR1: Hsero_0856
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Entry
Hsero_0856 CDS
T01268
Name
(GenBank) inner membrane transmembrane (Na+-driven multidrug efflux pump) protein
KO
K26939
MATE family, multidrug efflux pump
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_0856
Transporters [BR:
hse02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
Hsero_0856
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
ADJ62374
UniProt:
D8J037
LinkDB
All DBs
Position
complement(945119..946483)
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AA seq
454 aa
AA seq
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MSSRHHVGRIARLAWPLLVGQLALIANGVIDTVMVSRFSALDLAALALGVSIYVSVFVGL
SGVLQALQPTIGQLFGAGRHDEIGDEVRQGMWLAVFLSVIGALVLMFSPLFLSVAKASPE
LVEKATLYLRIEALALPATLFFRVYSALNTAIARPKMVMAIQVCGLLLKLPLNALLIFGG
LGLPAFGGPGCAIATTLIAWLMMLAAWLLVARLPVYRPLKLFGRGFVAPSWKTLRRLLWL
GIPIGMSYFIEVTAFTLMAVFIARLGAVPVAGHQITANVGTVLYMLPLSIASATSTLVAQ
AIGGGNFAVAKKIGNAGIRLAIALSVLVGLVVYCLRGQIIRAYTPDPLIIGAALPLFLYI
AFYQLFDSLQVTTAFVLRAYKVAVVPTVIYAVTLWGVGLGGGYLLGLDPLGLTPPNLLGP
AGFWLANSASLGLVGIGLLYYLRHIQRRWLNAPA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ctgtcctcccgtcaccacgtcggccgcatcgcgcggctggcctggccgcttctggtcggc
cagctggcgctcatcgccaatggcgtgatcgataccgtgatggtctcgcgcttctcggcg
ctggacctggccgcgctggcgctgggggtatcgatctacgtgagtgtcttcgtgggcctg
tcgggggtgctgcaggcgctgcagccgaccatcggccagctcttcggcgccggccgtcac
gacgagatcggcgacgaggtcaggcaagggatgtggctggccgtgttcctgtcagtcatc
ggcgcgctggtgctgatgttctcgccgctctttctcagcgtggccaaggcctcgccggag
ctggtggaaaaggccacgctgtacctgcgtatcgaagcgctggcgctgccggccacgctg
ttcttccgcgtctattccgcgctcaacaccgccatcgcccgccccaagatggtcatggcc
atccaggtctgcggcctgctgctgaagctgccgctgaacgccctcttgatcttcggcggc
ctgggcctgccggcctttggcggccccggctgcgccatcgccaccaccctgatcgcctgg
ctgatgatgctggcggcctggctgctggtggcgcgcctgccggtgtatcgccccttgaag
ctgttcggccgcggtttcgtcgccccttcctggaagaccctgcgacggctgctgtggctg
ggcattcccatcggcatgtcctacttcatcgaagtcaccgcctttaccctgatggccgtc
ttcatcgcgcgcctgggtgcggtgccggtggccggacaccagatcaccgccaatgtcggc
acggtgctctacatgctgccgctgtccattgccagcgcgaccagcaccctggtggcgcaa
gccattggcggcggcaactttgcggtggccaagaagatcggcaatgccggcatccgcctg
gcgatcgcgctgtcggtgctggtcgggctggtggtctactgcctgcgcgggcagatcatc
cgcgcctatacacctgatccgctcatcatcggcgcagcgctgccgctgtttctctacatc
gccttctaccagctcttcgattccctgcaggtgaccaccgccttcgtgctgcgcgcctac
aaggtggcggtggtgccgaccgtgatctatgccgtcacgctatggggcgtgggactgggc
ggcggctatctgctcggcctggatccgctcgggctgaccccgccgaacctgttgggaccg
gccggcttctggctggccaacagcgccagcctgggcttagtcgggatcggcctgctctac
tacctgcgccacatccagcgccgctggctcaacgctccagcttga
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