Herbaspirillum seropedicae SmR1: Hsero_0955
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Entry
Hsero_0955 CDS
T01268
Name
(GenBank) conserved hypothetical protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
hse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_0955
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hsero_0955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_0955
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Hsero_0955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
ADJ62472
UniProt:
D8J0R7
LinkDB
All DBs
Position
1046886..1048202
Genome browser
AA seq
438 aa
AA seq
DB search
MLHSKILKAIALTTVLLTAGLQQARADEQFFPLQSYRVGPYAAGGTGFFGGFIDYLNLVN
LRDGGVGGVKLTWEEGETQYEVERGVEVYERLKQRPNIATWNPLSVGIAYALLDRVTADK
VPLLTINHGRTDTTDGRVFKYIFPLLLNPYSETSGIVNYIASKEGGADKLKGKKIVVLYH
GSPYGKETIPIYKLLSEKYGFSLQQIEVPHPGNDQQAQWLAIRRAKPDYVVLRGWGVMNP
VALKTAQKSGFPADRIIGNVWSNSEEDVIPAGDAAKGYVAITTVAAGAQYPVLQEIQKTV
YGAGKGNLQDPKRIGSVYHNLGVLNGILNVEAIRIAQARFGKRTLTGDEIRWGLENLNID
QARTAALGAKGLFHSIHVTWDNHEGDGLVAFQQWDGKQWHVVSDWIAPDWKLLRPIIEKS
ALAYAKEKNIKVRKSIDD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgctgcactcaaaaatactaaaagcgattgccctcaccacagtccttctgacggccggc
ctgcaacaggcgcgcgccgatgaacagttctttcccctgcagagttaccgcgtcggtccc
tatgccgccggcgggaccggtttcttcggcggtttcatcgattacctgaacctggtcaac
ctgcgcgatggcggcgtgggcggcgtcaagctgacctgggaagagggcgagacccagtac
gaagtggaacgcggcgtggaagtctacgagcgcctcaagcaacgccccaatatcgccacc
tggaatccgctctcggtcggcatcgcctatgccctgctggaccgcgtgaccgctgacaag
gtgccgctgctgaccatcaaccatggccgcaccgataccaccgatgggcgcgtgttcaag
tacatcttcccgctgctgctcaatccctacagcgagacctcgggcatcgtcaactacatc
gccagcaaggagggcggcgccgacaagctcaagggcaagaagatcgtggtgctctatcac
ggttcgccctatggcaaggaaaccatccccatctacaagctgctgtcagaaaaatacggc
ttctcgctgcaacagatcgaagtgccgcatcctggcaatgaccagcaggcgcaatggctg
gcgatccgccgcgccaagccggattacgtggtgctgcgcggctggggcgtgatgaatccg
gtggccttgaagacggcgcagaagtcgggcttcccggccgaccgcatcatcggcaacgtc
tggtccaattcggaagaagacgtgatcccggcaggggacgctgccaagggctatgtggcc
atcaccaccgtggcggcgggcgcacagtatccggtgctgcaggagatccagaagaccgtc
tatggcgccggcaagggtaatctgcaggaccccaagcgtatcggcagcgtctatcacaac
ctgggcgtgctcaacggcatcctcaatgtggaagcgatccgcatcgcccaggccaggttc
ggcaagcgtacgttgaccggtgacgaaatccgctggggcctggaaaacctcaatatcgac
caggcgcgcaccgcagcgctgggcgccaagggcctgttccattccatccatgtgacctgg
gacaaccacgaaggcgatggcctggtggccttccagcaatgggacggcaagcagtggcac
gtggtctcggactggatcgcgccggactggaagctgctgcgtcccatcatcgaaaagtcc
gccctggcctatgccaaggaaaagaacatcaaggtgcgcaagagcatcgatgactga
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