Herbaspirillum seropedicae SmR1: Hsero_1023
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Entry
Hsero_1023 CDS
T01268
Symbol
deoC
Name
(GenBank) 2-deoxyribose-5-phosphate aldolase protein
KO
K01619
deoxyribose-phosphate aldolase [EC:
4.1.2.4
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00030
Pentose phosphate pathway
hse01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Hsero_1023 (deoC)
Enzymes [BR:
hse01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.4 deoxyribose-phosphate aldolase
Hsero_1023 (deoC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoC
Motif
Other DBs
NCBI-ProteinID:
ADJ62540
UniProt:
D8J0Y5
LinkDB
All DBs
Position
complement(1132326..1133357)
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AA seq
343 aa
AA seq
DB search
MNMTRKTPSLRSAQGEADVAQPDSAPTGHPRNSVQAYDAAAFEHLRINLSAAEKRVATLK
GRRSVKKDAQAAWLLKAITCIDLTTLSGDDTPQRVRRLCAKAANPLRADLLEALGMQDRG
LTTGAVCVYHRFVKTAVDALEGKGIPVAAVSTGFPAGLNPHALKLKEIEASVRDGAAEID
IVITREHVLTGNWEALYREMRDFRQACGEAHVKAILATGELKTLRNVAKASMVCMMAGAD
FIKTSTGKESVNATPLVSLVMLRMIRQYQEMTGIKVGYKPAGGVATAKDVLEYQVLMKEE
LGHDWLQPDLFRVGASSLLADIERQLEHHVTGRYSAFNRHAIG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgacccgcaagaccccttccctgcgcagtgcgcagggcgaggccgatgtcgcg
cagcccgacagcgcccccaccggccatccgcgcaacagcgtgcaagcctatgacgccgcc
gccttcgaacacctgcgcatcaacctgagcgccgccgagaagcgcgtcgctaccctcaag
ggccgccgttcggtcaagaaggatgcccaggccgcgtggctgctcaaggccatcacctgc
atcgatctgaccacgctctccggcgacgacacgccgcaacgcgtacgccgcctgtgcgcc
aaggcggccaatccactgcgcgcagacctgctcgaagcactgggcatgcaggaccgtgga
ctgacgaccggcgcggtgtgcgtctatcaccgcttcgtcaagacggcggtagacgcattg
gaaggcaagggtattccggtggccgccgtgtccaccggatttccggcgggcctcaatccc
catgcactcaagctcaaggaaatcgaagcgtcggtacgcgatggcgcggccgagatcgat
atcgtcatcacccgcgaacacgtgctcaccggcaactgggaagcgctgtaccgcgagatg
cgcgacttccgccaggcctgcggcgaagcccacgtcaaggccatcctcgccaccggcgaa
ctcaagaccctgcgcaacgtggccaaggcttccatggtctgcatgatggccggcgctgat
ttcatcaagacctccaccggcaaggaaagcgtcaacgccacgccgctggtgtcgctggtg
atgctgcgcatgatccgccaataccaggagatgaccggcatcaaggtcggctacaaaccc
gccggcggcgtggccacggccaaggacgtactggaataccaggtgctgatgaaggaagaa
ctgggccatgactggctgcagccggacctcttccgcgtcggcgcctccagcctgctggcc
gatatcgagcgccagctggaacaccacgtcaccggccgttactccgccttcaaccggcat
gccatcggctaa
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