Herbaspirillum seropedicae SmR1: Hsero_1062
Help
Entry
Hsero_1062 CDS
T01268
Name
(GenBank) ABC-type sugar transport system, periplasmic component protein
KO
K10439
ribose transport system substrate-binding protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
hse02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_1062
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Hsero_1062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_1062
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Hsero_1062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
SBP_bac_11
Glyco_hydro_3_C
bact-PGI_C
PrpR_N
Motif
Other DBs
NCBI-ProteinID:
ADJ62579
UniProt:
D8J124
LinkDB
All DBs
Position
1174765..1175673
Genome browser
AA seq
302 aa
AA seq
DB search
MKKALIALALTTLAAAPAMAQEVSKLKIGMSFQEMNNPYFVSMKKALDEAAKSLGAKVIA
TDAAHNVAKQIADIEDMLQQNIDILLINPTDSAGVEAAVKAAKARNVIVVAVDANASGPV
DMFVGSKNKDAGYQSCRALADAIGGKGEVAILDGIPVVPILQRVEGCKQALAEYKDIKLV
ATQNGRQDRSVALGVVENMIQSRPNLKGIFSVNDGGAMGALAAIQGSGKDIKLTSVDGAP
EAVKAIADGGPFVETTAQFPRDQVRVGLAMALAKKWGARVVPKEVPIDVMPVTKKNAAGF
SW
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcactgatcgcactggccctcaccacactggctgccgccccggcgatggcg
caggaggtgagcaagctcaagataggcatgagcttccaggaaatgaacaatccctatttc
gtctcgatgaagaaggccctggacgaggccgccaagtcgctgggcgccaaggtgatcgcc
accgatgcggcccataacgtggccaagcagatcgccgacatcgaagacatgctgcaacag
aatatcgacatcctgctgatcaacccgaccgactcggccggcgtggaagcagcggtgaag
gcggccaaggcgcgcaacgtcatcgtggtggcggtcgacgccaatgcctctggtccggtg
gatatgttcgtcggttccaagaacaaggacgccggctaccagtcctgccgtgcgctggcc
gacgccatcggcggcaagggcgaggtggccatcctcgacggcattccggtggtgcccatc
ctgcaacgcgtggaaggctgcaagcaagccctggccgagtacaaggacatcaagctggtc
gccacccagaacggccgccaggaccgctcggtggcgctgggcgtggtggagaacatgatc
cagtcgcgtcccaatctgaagggcatcttctcggtcaatgacggtggcgcgatgggcgcc
ttggcggccatccagggcagcggcaaggatatcaagctgacctcggtggatggcgcgccc
gaggcggtcaaggccatcgccgacggcggccccttcgtcgagaccacggcccagttcccg
cgtgaccaggtgcgcgtgggcctggccatggcgctggccaagaagtggggcgcgcgcgtg
gtgcccaaggaagtgcccatcgatgtgatgccggtgaccaagaagaacgccgctggcttc
agctggtaa
DBGET
integrated database retrieval system
