Herbaspirillum seropedicae SmR1: Hsero_1064
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Entry
Hsero_1064 CDS
T01268
Symbol
rbsC
Name
(GenBank) ABC-type ribose/xylose/arabinose/galactoside transport system, permease component protein
KO
K10440
ribose transport system permease protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_1064 (rbsC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_1064 (rbsC)
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Hsero_1064 (rbsC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ADJ62581
UniProt:
D8J126
LinkDB
All DBs
Position
1177238..1178224
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AA seq
328 aa
AA seq
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MPHDANALPAASLHTAASARWRSLIHSPLALPLAGLVVVSLLMGLASDNFFTLSNWFNVL
RQVSIVGILAVGMSFVILTGGIDLSVGAAMALAGTISAGLIVNSGLPAPLALLCGVGLAT
CIGLLNGALVAWGRMPAIIVTLATMGVARGVGLIYSGGYPISGLPGWISWFGVGRIGMVP
VPVILMLIVYALAWLLLQRTAFGRHVYAIGGNEMAARLSGVKTTRIKLAVYAISGFTSGL
AAIILTGRLMSGQPNAGVGFELDAIAAVVLGGTAIAGGRGLVVGTLIGAVLLGILNNGLN
LMGINPYLQDIIRGVIILLAIYIAREWR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgccgcatgacgccaacgcactgcccgcagcctcgctgcacaccgccgccagcgcccgc
tggcgcagcctgatccattcgccgctggcgctgcccttggccgggctggtggtggtgtcg
ctgctcatggggctggcctcggacaatttcttcaccctctccaactggttcaatgtgctg
cgccaggtgtccatcgtcggcatcctggccgtgggcatgagctttgtcatcctcactggc
ggcatcgatctctcggtgggcgcggccatggcgctggccggcacgatctcggccggactc
atcgtcaacagcggcctgcccgcgccgctggcgttgctgtgcggtgtcggactggccacc
tgcatcggcctgctcaatggcgcactggtggcgtgggggcgcatgccagccatcatcgtc
acgctggccaccatgggcgtggcgcgcggagtggggctgatctattcgggcggctatccg
atctcgggtctgccgggctggatctcgtggtttggcgtgggtcgcatcggcatggtgcca
gtgccggtgatcctgatgctgatcgtctatgcactggcctggctgttgctgcagcggacc
gcctttggccgccatgtctacgccatcggcggcaatgagatggcggcgcgcctgtcgggc
gtgaagaccacgcgcatcaagctggcggtgtatgccatttccggcttcacctcgggcttg
gccgcgatcatcctgacgggccggctcatgtcgggccagcccaatgcgggcgtgggcttc
gaactggatgcgattgccgccgtggtgctgggcggcaccgccatcgccggagggcgcggg
ctggtggtgggcacgctcatcggcgcggtgctgctgggcatcctcaacaatggcctgaac
ctgatgggcatcaatccctacctgcaagacatcattcgcggcgtgatcatcctgctggcg
atctatatcgcacgggaatggcgctga
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integrated database retrieval system
