Herbaspirillum seropedicae SmR1: Hsero_1107
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Entry
Hsero_1107 CDS
T01268
Symbol
dctQM
Name
(GenBank) TrapT dctQ-M fusion permease, dicarboxylate transport protein
KO
K21393
TRAP-type transport system permease protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hsero_1107 (dctQM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_1107 (dctQM)
Transporters [BR:
hse02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Hsero_1107 (dctQM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DctQ
CitMHS
Motif
Other DBs
NCBI-ProteinID:
ADJ62624
UniProt:
D8J1K3
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All DBs
Position
complement(1257724..1259580)
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AA seq
618 aa
AA seq
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MSALSLEQPVADERSLAARLEHWLGLAIEIPAAALVVGEVAVLLAGVIMRFIFNNPIPWA
DELASILFLWLANLGAAVALRRGTHMRTTVLVGFMSERGKAWAEALAIIAPCVMLLILMH
PMWEYAEDEMFVQTPALGWPNTVRAAAVAVGAALMIALSLLRISRQKLVDLVGVLALLAV
VAGAMYLGAAWLQAIGNWNLVVFFGLVLAVSVLLGIPIAFCFGLATVAFMLTVTTSPLAV
VAGRFDEGMSSLILLAVPLFILLGHLVEMTGMAKAMVDFLASLLGHVRGGLNYVLLGAML
LVSGISGAKTADMAAVAPVLLPEMKRRGNHEGELISLLAASGAMAETIPPSLVLITIGSV
AGVSIAALFTGGIMPGIVLAVLLAILARWRSAEIMEGIQRAPGRVVLRTLIIALPALLLP
ILIRTAVVEGVATATEVSTIGIAYSVVAGLLVYRKFDWKRLYPMLVDTAALSGAILFIIG
TATGMSWALTQSGFSHALAEAMTSVPGGKYGFLLVSIAAFIVLGSVLEGIPAMVLFAPLL
FPVAKAIGVHEVHYAMVIILSMGVGLFAPPFGLGYYAACTIGRVHPDVAVKRIWPYLGAL
VVGLLIVAFVPWFSIGFL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccctgtcgctggagcagccggtggcggatgagcgctcgctggctgcgcgcctg
gaacactggctgggcctggccatcgagatccccgccgcggcgctggtggtgggcgaggta
gcggtgctgctggcgggcgtgatcatgcgcttcatcttcaacaaccccatcccctgggcc
gatgaactggcctccatcctcttcctctggctggccaatctcggcgccgccgtggccctg
cgccgcggtacccacatgcgcaccacggtgctggtgggcttcatgagcgaacgcggcaag
gcgtgggccgaagccctggccatcatcgcaccgtgcgtgatgctgctgatcctgatgcat
ccgatgtgggaatacgccgaagacgaaatgttcgtgcagacccctgccctgggctggccc
aataccgtacgcgccgccgccgtggctgtcggtgcggcgctgatgatcgccctctcactg
ctgcgcatctcgcgccagaagctggtggacctggtcggcgtgctggccctgctggcggtg
gtggccggggcgatgtacctcggcgcggcttggctgcaggccatcggcaactggaacctg
gtggtgttcttcggcctggtgctggcggtgtcggtgctgctgggcattcccatcgccttt
tgctttggcctggcgacagtggccttcatgctgaccgtgaccaccagcccgctggcggtg
gtggccggacgtttcgatgaaggcatgtcttcgctgatcctgctggcggtgccgctgttc
atcctgctgggccatctggtggagatgaccggcatggccaaggccatggtggacttcctg
gcctcgctcctgggccatgtgcgcggtggcctcaactatgtgttgctgggcgcgatgctg
ctggtgtcgggcatctccggcgccaagaccgccgacatggcggccgtggcgccggtgctg
ctgccggagatgaagcgccgtggcaatcacgagggggagctcatttcgctgctggccgct
tccggcgccatggccgagaccattccgccctcgctggtgttgatcaccatcgggtcggtg
gcgggcgtgtcgattgcggcgctcttcaccggcggcatcatgccgggcatcgtgctggcc
gtgctgctggcgatcctggcgcgctggcgcagcgccgagatcatggaaggcatccagcgc
gccccgggccgcgtggtgctgcgtacgctcatcatcgccctgccggcgctgctgctgccc
atcctgatccgcacagcggtggtcgaaggcgtcgccaccgccaccgaagtctccaccatc
ggcatcgcctattcggtggtggcgggtctgctggtctaccgcaagttcgactggaagcgg
ctctatccgatgctggtcgataccgcagccctgtcgggcgcgatcctcttcatcatcggc
acggccaccggcatgtcgtgggcgctgacgcagtcgggcttctcgcatgcgctggccgaa
gccatgaccagcgtgccgggcggcaagtatggtttcctgctggtgtccatcgcggccttc
atcgtgctgggcagcgtgctggagggtatccccgccatggtgctgttcgcgccgctgctc
ttcccggtggccaaggccattggcgtgcatgaggtgcattacgcgatggtcatcatcctt
tccatgggcgtgggcctgttcgcgccgcccttcggtctgggctactacgccgcctgcacc
atcggccgcgtgcatccggacgtggcggtcaagcgcatctggccttacctgggtgcgctg
gtggtgggcctgctgatcgtggccttcgtgccttggttctctatcggtttcctctga
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