Herbaspirillum seropedicae SmR1: Hsero_1170
Help
Entry
Hsero_1170 CDS
T01268
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase protein
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00541
Biosynthesis of various nucleotide sugars
hse01100
Metabolic pathways
hse01250
Biosynthesis of nucleotide sugars
Module
hse_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Hsero_1170 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hse01005
]
Hsero_1170 (kdsB)
Enzymes [BR:
hse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
Hsero_1170 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
hse01005
]
Lipid A
Hsero_1170 (kdsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
NTP_transferase
Motif
Other DBs
NCBI-ProteinID:
ADJ62687
UniProt:
D8J1R6
LinkDB
All DBs
Position
1335557..1336372
Genome browser
AA seq
271 aa
AA seq
DB search
MSFTVIIPARLASTRLPNKPLADLGGKPMIVRVAERAAQSGAARIIVATDHHDIHAACQA
HGVEVAMTRADHPSGTDRIAEVAAALDLAEDAVVVNVQGDEPLIDPGLIAATAAHIKPGV
PMATAAHAIESAADAFNPNVVKVVLNKEGCAMYFSRATIPWHRDAFAQSREVLPDASGPD
HANEYVPLRHIGLYAYSNRFLQLYPTLSPSPVERIEALEQLRVLWHGHAIAVHVTSLLPE
AGVDTPEDLLRVRKHFEAPPDSPLVQTISSL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcaccgtcatcatcccggcgcgcctggcttccacgcgcctgcccaacaagccc
ctggccgacctgggcggcaagcccatgatcgtgcgggtggccgagcgcgcagcccagtcg
ggtgcggcgcgcatcatcgtggccaccgaccatcatgacatccatgcggcctgccaggcc
catggggtggaagtggccatgacccgcgccgaccatccctccggcaccgaccgcatcgcc
gaagtggcggccgcgctggacctggccgaggatgcggtggtggtcaacgtgcagggcgat
gaaccgctgatcgatccgggcctcatcgccgccacggcggcccacatcaagcccggcgtg
cccatggccacggccgcgcatgccatcgagagcgccgccgatgccttcaatcccaacgtg
gtcaaggtggtgttgaacaaggaaggttgcgccatgtacttctcgcgcgccaccattccc
tggcaccgcgatgccttcgcccagtcgcgcgaggtcttgcctgacgccagcggtcccgac
cacgccaacgaatacgtgccgctgcgccatatcggcctgtacgcctacagcaaccgcttc
ctgcagctctatcccacgctctcgccgtcgccggtggaacgcatcgaggcgctcgaacag
ctgcgcgtgctctggcatggccacgccatcgccgtgcacgtgacctcgctgctgcccgag
gccggggtggatacccccgaggatttgttgcgcgtgcgcaagcatttcgaggctccgccc
gacagtcccctggtgcagaccatttcgtccctctga
DBGET
integrated database retrieval system
