Herbaspirillum seropedicae SmR1: Hsero_1201
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Entry
Hsero_1201 CDS
T01268
Symbol
vsrA
Name
(GenBank) transmembrane sensor histidine kinase protein
Organism
hse
Herbaspirillum seropedicae SmR1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
HATPase_c
HisKA_3
PAS
HATPase_c_2
PAS_9
HATPase_c_3
PAS_8
PAS_7
Motif
Other DBs
NCBI-ProteinID:
ADJ62718
UniProt:
D8J1U7
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Position
1361426..1363459
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AA seq
677 aa
AA seq
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MQKNNDGLRPSSADIQNSASVEYFAASHAHYSSMATLAMGLAMAVILLGLVVLLASLLGE
EYRRLLSGLLEMREMTAVGLILGASALYLRCIHGGARRSGLRRVAAGLSWMLLALGLGTL
AHGLMYALGWLPIDQNHPLSPLVIPPLLSLGFVVMAAVLLLQDWRMLGGYYPAEYLSFAL
IGLAAIPLVGYLYGVSQFVYLDFPLPVSLLSALVMALLATALLMARPAHPLMAIITRIAP
GGQMLRHLLPQTVFLLLAFSLLLNWGMTHGWILPELLLPTLTLINGVIVLFIFWGSASRL
DSEYGERTRNAQKLAETSALLNAVSESTSDPIFVKNRQGLMIFANPATLHKLGKTWEETM
YRSSRELFLVPEEADTIDRDDRRVMASGKPEKLEQTLHLPEGVVTFQTAKVPWFGKDGSV
QGVIGISTDITERKQAEDELRQRESQLEKTVIQRTALLRELTNHLETVREEEKRAIAREL
HDNMGASLTALSMHLEGVYQILPPDEKWADRKVRMQGLMKSLVATTRRIQTELRPNTLDL
FGLKAAISEQLDELHERTGIACHASLPDEDVEVGHEMEIAIYRMLQEMLNNVTKHAKASK
VDVILDIDEDHVALTVRDDGVGIPEERRDNHKTYGLRGLRERATFFGGEVDIRSTPGKGA
LITISLPIRPELVPSEA
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaacaacgacggccttcgtccgtcctccgccgatatccagaacagcgcatcg
gtcgagtatttcgccgcgtcccacgcgcattacagcagcatggccacgctggccatgggg
ctggccatggccgtgatcctgctgggcctggtagtgctgctggccagcctgctgggcgag
gaataccggcgcctgctctcgggcctgctggaaatgcgcgagatgacggcggtcggcctg
atcctgggtgcttcggccctctacctgcgctgcatccacggcggtgcgcgccgctccggc
ttgcgccgcgtcgccgccggcttgtcctggatgctgctggcgctggggctgggaacgctg
gcgcatggactcatgtatgcgctgggctggctgcccatcgaccagaaccatccgctgtcg
cccttggtgattccgcccttgctctcgctgggcttcgtggtcatggcggcggtgctgctg
ctgcaggactggcgcatgctgggcggctactatccggctgaatatctttcctttgcactg
atcggcctggcggccattccgctggtgggctacctgtacggggtgagtcagttcgtctac
ctggatttccccttgccggtgtcgctgctgtcggcgctggtcatggcgctgctggccacg
gcgctgctcatggcgcggccggcccatccgctcatggccatcatcacccgcatcgccccc
ggtggccagatgttgcgccacctgctgccgcagacggtgttcctgctgctggccttcagt
ctcttgctcaactggggcatgacccatggctggatcctgcctgagctgctgctgccgacg
ctgaccctgatcaatggcgtcatcgtgctgttcatcttctggggttcggccagccgtctc
gatagcgaatacggcgagcgcacccgcaatgcccagaaactggccgagaccagcgccttg
ctgaacgccgtcagcgaaagcaccagcgaccccatcttcgtgaagaaccgccagggcctg
atgatcttcgccaatcctgccaccttgcacaagctgggcaagacctgggaagagaccatg
taccgctccagccgcgagctgttcctggtgccggaagaggccgataccatcgatcgcgat
gatcgccgcgtgatggcctcgggcaagcccgagaagctggagcagaccctgcatctgccg
gagggcgtggtgaccttccagactgccaaggtgccctggttcggcaaggatggcagcgtc
cagggcgtcatcggcatcagcaccgacatcaccgagcgcaagcaggcagaggacgaattg
cgccagcgcgaaagccagctggaaaagaccgtcatccagcgtaccgccttgctgcgcgag
ctgaccaaccacctggagacggtgcgcgaagaagagaagcgcgccattgcccgcgagctg
cacgacaacatgggcgcctcgctgacggccttgtcgatgcatctggagggggtctaccag
atcctcccgccggatgaaaagtgggccgaccgcaaggtccgcatgcaaggcctgatgaag
tcgctggtggccaccacacggcgtatccagaccgagctgcggcccaataccctggacctg
ttcggcctgaaggcagcgatctccgaacagctcgatgaactgcacgagcgcaccggcatt
gcctgccatgccagcctgcccgatgaagacgtggaggtgggacatgaaatggaaattgcc
atctaccgcatgctgcaggaaatgctcaacaacgtgaccaagcacgccaaggccagcaag
gtggacgtgatcctcgatatcgatgaagaccacgtggcgttgaccgtgcgcgacgacggt
gtgggcattcccgaagagcgccgcgacaaccacaagacctacggcctgcgtggcctgcgc
gaacgcgccaccttctttggcggcgaggtcgatatccgctccacgcccggcaagggcgcg
ctcatcaccatcagcttgccgatccggcctgagttggtgcccagcgaagcctga
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