KEGG   Herbaspirillum seropedicae SmR1: Hsero_1239
Entry
Hsero_1239        CDS       T01268                                 
Name
(GenBank) transmembrane protein
  KO
K22132  tRNA threonylcarbamoyladenosine dehydratase
Organism
hse  Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:hse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hse03016]
    Hsero_1239
Transfer RNA biogenesis [BR:hse03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Hsero_1239
SSDB
Motif
Pfam: ThiF Sacchrp_dh_NADP NAD_binding_7 3HCDH_N ApbA DUF6216 Cons_hypoth95 Shikimate_DH
Other DBs
NCBI-ProteinID: ADJ62755
UniProt: D8INT5
LinkDB
Position
1402666..1403523
AA seq 285 aa
MNASIDLNDIDYERRFGGVARLYGAAALQRFRQARVCVVGVGGVGSWIVEALARSAIGHL
TLVDLDNLAESNVNRQIHALTTTLGQAKVTALHERIRQINPTCVVTEVEDFVDPDNVEKM
LGGERFDYVIDAIDNVPAKVAMIAWCRKNGMPMVTIGSAGGQIDPTQIEIRDLCRTEQEP
LLAKVRKRLRAQHGFPRGTKNKFHIDAVFSTEPLRFPELAEGEACEIAPAEDIDVGEDAA
DSTQAGVTGLNCAGFGSAMVVTASFGLVAAAHVLKKLAEQAAAQP
NT seq 858 nt   +upstreamnt  +downstreamnt
atgaacgcatccatcgacctcaacgacatcgactatgaacgccgcttcggcggcgtggcc
cgcctgtacggcgccgccgccctgcaacgcttccgccaggcgcgggtgtgcgtggtcggg
gtcgggggcgtgggctcgtggatcgtcgaagcgctggcgcgcagcgccatcggccacctg
accctggtcgacctggacaacctggccgaatccaacgtcaaccgccagatccatgccttg
acgaccaccttgggccaggccaaggtcacggccctgcatgagcgtatccggcagatcaat
cccacctgcgtggtcaccgaggtggaggatttcgtcgatcccgacaatgtggaaaagatg
ctgggaggcgagcgtttcgattacgtcatcgacgccatcgacaacgtcccggccaaggtc
gccatgatcgcctggtgccgcaagaacggcatgcccatggtcaccatcggcagcgcgggc
gggcagatcgacccgacccagatcgagatccgcgacctctgccgcaccgagcaggaaccg
ctcttggccaaggtgcgcaagcgcctgcgcgcacagcatggcttcccgcgcgggaccaag
aacaagttccatatcgacgccgtgttctccaccgagccgctgcgctttccggaactggcc
gagggcgaggcctgcgagatcgccccggcggaagacatagatgtcggcgaagacgctgcc
gacagcacccaggccggcgtgaccggcctgaactgcgccggtttcggttcggccatggtg
gtgacggccagcttcggcctggtggccgctgcgcacgtcctcaagaaactggccgagcag
gctgctgcccagccttga

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