Herbaspirillum seropedicae SmR1: Hsero_1278
Help
Entry
Hsero_1278 CDS
T01268
Name
(GenBank) AraC family transcription regulator protein
KO
K04033
AraC family transcriptional regulator, ethanolamine operon transcriptional activator
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hse03000
]
Hsero_1278
Transcription factors [BR:
hse03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Hsero_1278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ADJ62794
UniProt:
D8INX4
LinkDB
All DBs
Position
complement(1448988..1449962)
Genome browser
AA seq
324 aa
AA seq
DB search
MLQSVLRFQDVHEHAAAISPWNLHYAQISAGKVESSLLQLSTPRCHVFRERINQRVVQQG
EAPREQVCFAFPVAAPGKAHVQGREVDEHCMLFLQGGDEFMCHLPIDTDLFAITFDRALF
EAQLEHTASPERIVALMKQPVVKVASQDLHACRERLLNIFYWAMLSIEDGHGQHPQHEQE
LELSLLAELLALLSAPDCGASRQISTIRSYIVDKLHRQTMNDAINVPSIFEVCEQMQVSR
RTVQNSFQTVTETTPRNYLRCVRLNGVRRALMSTSAEQITIGDIASRWGFFHLSHFAEDY
RALFCELPSQTIRRSHAFGRAATS
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaaagcgttcttcgttttcaggatgtgcatgagcacgccgctgcgatcagtcca
tggaatctgcactatgcgcagatttcggcgggcaaggtggaaagctcgctgctgcagttg
tccacgccccgctgccacgtctttcgcgagcgcatcaatcagcgtgtggtgcagcagggg
gaagcgcccagagagcaggtgtgctttgcctttcctgtcgcagcgcccggcaaggcgcat
gtacagggccgcgaggtggatgagcactgcatgctgttcttgcaggggggggacgagttc
atgtgtcacctgcccatcgacacggacttgttcgccatcaccttcgaccgcgcgcttttt
gaggcgcagcttgagcacacggcaagtccggaacggattgttgcgctgatgaagcagccc
gtcgtgaaagtcgcctcccaggacttgcacgcctgccgcgagcggctgctgaacatattc
tattgggcgatgctatccatcgaggatggacacggacagcacccgcaacacgagcaggaa
ctggagctttccctgttggccgaattgctggcgctgctgtcggcgcccgactgtggcgcc
agccggcagatcagcacgatacgcagctacatcgtcgacaagttgcatcggcagaccatg
aacgatgccatcaatgttcccagcatcttcgaggtgtgcgagcaaatgcaggtcagccgg
cgcacggtgcagaacagctttcaaaccgtgaccgagacgacgccccgcaactatctgcgc
tgcgtgcggctcaacggcgtacgacgggcattgatgtcgacctctgcggaacagatcacg
ataggcgatatcgcctcacgttggggattctttcatctgagccactttgcagaggattac
cgggccttgttctgcgaactgccatcccagaccattcgccgctcccacgccttcgggaga
gcggcgacgtcctga
DBGET
integrated database retrieval system
