Herbaspirillum seropedicae SmR1: Hsero_1294
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Entry
Hsero_1294 CDS
T01268
Name
(GenBank) filamentous hemagglutinin protein
KO
K15125
filamentous hemagglutinin
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hse00536
]
Hsero_1294
Glycosaminoglycan binding proteins [BR:
hse00536
]
Heparan sulfate / Heparin
Microbial pathogens
Hsero_1294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
ADJ62810
UniProt:
D8INZ0
LinkDB
All DBs
Position
1465642..1473618
Genome browser
AA seq
2658 aa
AA seq
DB search
MSKHMIDTIHFQSGRHGVLRRAMAALMIMLCVVPPGYPQIVADPNAGAGKRPVVDNTANG
RPLVQIATPSAAGVSHNQYSQFNVGPNGAILNNARDVVLTQQGGYVGANPNLQGGAARVI
LNEVTSTSPSQLRGYTEVAGQRAEVIIANPNGISCDGCGFINTSRGVLTTGVPLFGGNGS
LEAFRVSRGAIQIGSGGLNGANTDQLDLIARSVQVNGELWGNRLNLVTGANRVNYGDLGL
SVIAGEGNAPTIGVDVARMGGMYAQKIMLVGTENGVGVRSLGTLAAQAGSFTLSSQGQIA
LSGKTSASDDIVLKSAVGTSNDGVLYAGRNAQLQGGVIENAGTLSAQGNLDITAAQLRST
GTLAAGVDQAGNVAQAGNLTVTASGDVLATGVNRAGADLQLVGGKIDLSHSSSSAGRKLG
AQASDALTLGGATVETLAGDLELGGATITLDGAKLTSSADARINAVAGLSNRGGEITSAG
AMNVTAASVDNSAGMISAATGGAGVLSLRSAGSISNGQGRIAAGAALNLAAASIQGQGSV
IANGDATLSLQSLNNEAGSLIQSNRDLRITTSGATGNQGALKAIGALNLTASQIDNAAGG
DISAAATTLQALNGDINNAGKIGGNTIATTSNALNNQGSMIGGDVTINADRLNNSGAAAA
IAATNSVQAFVRSALTNQDNALIYSLGKLVIAADATQSAAGDYLHRTGTLTNSSATIEAG
GDLAVSADTIVNKRSTLVIARDIFDGTESWQKYNYYWRSWGSGMSGPDSAGLMAAVTRTL
PFNDASAFGSRYGSILQLDLSSNRALVQFQGSNQLWVSYKAIKQNADGSYDMTFYEGKNC
DGSTLCPYQQMVWREYTGSRVQDQFDPSRYTSPAELKGIGTNGESAYDFRERSYNGSNYH
DAITAMSDAAKLNASGRITINTAALTNDASDIIAGGALTINGANGSAASGGVVNNIGYSI
NRTAIGTAVDHYDRHVGHHTYTTLNLTEVTALQTIDANIQSNQAVSISAQNLNNTTVGAA
TVPTRAGGVGHANITLPAGGLFTVRPEPGQRYLVETDRRFTDYKTFLGSDYMLGRLTMDP
SMTQKRLGDGFYEQKLINDQIAQLTGKKFLDGYTNAEAQYKALMDSGVASAASFKLTPGI
ALSADQMAALTSDIVWMVDTEVTLADGSRQHALVPTVYLAHGGSATLQASGALIGGRDVT
LAADTVNNSGIVRAEDKLAVAARDINNTGGELRGDKVDVLATETLNIGTDFQNYGRQGSV
TGRQVSLAANDINIIGAKIKADDTLKLAAQNNLTIAAATAQHDVKLTWSGAGEREENHGM
MRNGGVTAQLQQALGSTIEAGGDASFAAGRNIAVRGSSIDVKGNAALLAGGSVEVSAVKT
ATDSVVTGRSDRYDLNVVGHTENLTTSQIAAGKGLSIVASGQNGSGDITLAASRLSSKEG
EVTLNAAGDISIGAMQKNNDNRIDERGGKAWMKTHDSSSVAAGSLIEGEKGVNLIATGRS
DAKVSVAGSDIYSNGTIAIQAKGDVTVAETRSSSDEWQQAHSESRGFLSRSSSDRTDQVR
QDMANGSTLSGNKVVIDAGRNIAVRGSEVVSTELTSLRAANDVSITTTQNFTEQSHYKED
RKSGLMGAGFGISIGSQGQMANGNGSSVTNNASTVGSVNGNVNIIAGNAFRQIGSQVVAP
QGDINILAKSVDIGAAYDASVYTQENKFKQSGLTLAINSPVISVLQTGQQLIQAGQKTPD
KRMQALAAATLAKNAYDAGAALIDKPTDTSGVKITLSLGSSQSSNKVTQASSQAVGSTVA
AGGAVNIVASGGPRSDINVVGSAISAGGDVSLVADHEINLLAAQSAYSQHGNNNSSGASI
GIGFAMGGSQNGFTLELGANRARGNLDGDDLVNKASTISAGNQASLISGGDTNVRGSTVS
AKTVAAAIGGDLNIESLQDKSTYGSKQSSAGVGLSLCIPPFCYGASSVSGSLSGSKAKGD
YQSVVTQAGIKAGDGGFRLVVAGNTDLKGAVISSTAKAIEDGKNFLQTGTLTYSDISNHD
AYEASGYSVSGSMSSQLGDQSKAKTEADKAAANSRTGPGGSPGYSDTGGSQSSVTRSGIS
GGTVIITDEQGQKAATGQSAEQILASLNRDVDSSKDSSGALSKAWDGEALRQQVEAEAQI
RQAFGQTVAKSIGDYADTKERDLKNAAKQAEQDGDAEQAAKLRAEAARWGEDGTARAAVH
AAAGALSGGLAGAASAAAVSKLMPSLAEQIKKMGLPSELEGVVAAAAASGLGAIIGGSAG
AATAVTVDLNNRQLHQSERALLAKLAKEKAAAVCGQDADCTTRQTLFWSDMLERVANGKV
DNVEAAKNMDYLAKLANASAAPDSEGARGGLEAYLNAWRSAEALLQPYVGTPIVTNGVPA
FGDGSAQTYFSATEAQRSDRFLNTFLGSFPDPLAAGRPERDADRVDRFLAQNGSALKDYF
FEENLLGGKLAAKTLGLLGRLLGNETDLFFAGTVSPSAKGYIGVGKVTMEGYSVKLSNAE
MSLLQQIDKLETTKAQGELREMVSDFYFSRNGYKSFDGKCGVNCFDGVYLKGNTVFINEV
KPLSNNGSISLNGDTPGLPTQMTDAWIRNAADRLEQTGRSDAIKTAEMIRSALSDGRLVK
VVTAVDSKSITLIKLARD
NT seq
7977 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcatatgatcgatacgatccacttccagtctggccgccatggcgtgctacgc
cgggcgatggcggccttgatgatcatgctgtgcgtggtgccaccgggctatccgcagatc
gtcgccgatcccaatgccggcgctggcaagcgtcctgtggtggataacacggccaatggc
cgccccctggtgcagatcgctactccgagcgccgcgggtgtctcacacaaccagtactcc
cagttcaatgtcggacccaatggcgccattctcaacaacgcgcgcgatgtggtgctcacc
cagcagggcggttatgtgggagccaatcccaacctgcaaggtggcgccgccagggtcatt
ctcaatgaggtgaccagcacttctcccagccagctgcgcggctataccgaagtggccggc
cagcgcgccgaagtcatcatcgccaatcccaatggcatcagttgcgatggctgcggcttc
atcaataccagccgcggtgtactgaccaccggcgtgccgctgttcggcggcaacggcagc
ctggaggctttccgtgtttcgcgtggcgcaatccagatcggcagcggcggcctcaacggc
gccaataccgatcagctcgacctcatcgcccgcagcgtacaagtcaacggcgagctctgg
ggcaaccggcttaacctggtgacgggggccaatcgtgtcaattacggcgatctcggtctg
agcgttatcgccggcgaaggcaatgcgccaacgatcggcgtggacgtcgcgcgcatgggg
ggaatgtacgcgcagaagatcatgctggtgggcaccgagaacggcgtgggcgtgcgcagc
ctgggcaccctggcggcgcaagccggctccttcaccctgagcagccagggccagatcgcg
ctatcgggcaagaccagcgccagcgacgacatcgtactcaagagcgcggtcggcaccagc
aatgacggggtgctctatgccggcagaaatgcccagctccaaggcggcgtgatcgagaat
gccgggaccttgtcggcgcagggcaatctcgatatcaccgctgcccagcttcgctcgacc
ggtaccttggcggcgggggtagaccaggccggtaatgtggcgcaggccggtaacctgacc
gtgacggccagcggcgacgttctcgccacaggcgtgaaccgcgccggcgccgatctgcaa
ctggtcggcggcaagatcgatctatcccattccagcagcagcgccgggcgcaagctcggg
gcacaggcgagtgacgccctcacgctcggcggtgcgacggtggagacgttggccggtgat
ctggaactgggtggcgcgacgatcacgctggacggcgccaagctcaccagcagcgctgat
gcccggatcaatgcggtggccggcctgagcaatcgtggcggcgagatcactagcgccggc
gccatgaatgtcacagcggccagcgtggacaacagcgccggcatgatcagcgccgccaca
ggtggcgccggcgtgctgtccttgcgcagcgccggcagcatcagcaatgggcaagggcgc
atcgccgctggcgcagcgttgaatctggcggcggcatcgatacaaggccagggcagcgtg
attgccaatggcgatgccacgctgagcttgcagagcctcaacaacgaggcgggcagcctg
atccagtccaatcgcgacctgcgcatcaccaccagtggcgcaaccggtaaccagggggcg
ctcaaggcaatcggtgcactcaacttgacggccagccagattgacaatgctgccggcggc
gacatcagcgcggcggcgaccaccttgcaagcgctcaatggtgacatcaacaatgccggc
aagatcggcggcaacaccatcgccaccaccagcaatgcgctcaacaaccaaggttccatg
atcggtggcgatgtcaccatcaatgccgaccgcctgaacaacagcggcgctgccgccgcc
attgcagcgaccaacagcgtgcaggcctttgtgcgcagcgccctgaccaaccaggacaat
gcgctcatctacagcctcggcaagctggtcattgccgccgacgcaacacaaagtgcggcg
ggggactacctgcaccgcaccggaacattgaccaactcctcggccaccatcgaagccggc
ggcgacctggccgtgagcgccgataccatcgtcaacaagcgcagcacgctggtgattgcg
cgcgatatcttcgatggcaccgaatcctggcagaagtacaactactactggcgtagctgg
ggctcgggcatgagcggccccgacagcgccggcctgatggcagcggtcacgcgcaccttg
cccttcaatgatgccagcgcgttcggctcgcgatacggcagcatcctgcagctggatctt
tcttcgaaccgggcgttggtccagttccagggcagcaaccagctgtgggtgtcctacaag
gccatcaagcagaacgccgatggcagttacgacatgaccttctatgaaggcaagaactgc
gatggcagcacgctctgtccttaccagcaaatggtatggcgcgagtacaccggcagccgg
gtgcaggatcagttcgatccgagtcgctacaccagcccggccgaactcaagggcatcggc
accaatggcgagagcgcctacgatttccgtgagcgcagctataacggttcgaactaccac
gacgccatcaccgccatgagcgacgccgccaagctcaatgcctctggccgcatcaccatc
aataccgccgcgctgaccaacgacgccagcgatatcatcgccggcggggcgctgaccatc
aacggcgccaacggcagcgccgccagcggcggggtagtcaacaacatcggctactcgatc
aaccgcaccgcgatcggcacggcggtggatcactacgaccgccacgtcggtcaccacacc
tacacgacgctgaacctcaccgaggtgactgcgctgcagaccatcgatgcgaacatccag
tccaaccaggccgtctcgatcagcgcgcagaacctcaacaacaccacggtcggggcggcc
accgttcccaccagggccggtggcgtgggtcacgccaatatcaccctgccggctggcggt
ctgttcacggtgcgtcctgagccaggccagcgctatctggtcgagaccgaccgccgtttc
acggactacaagactttcctgggcagcgactacatgctgggccgcctgaccatggatccc
tccatgacccagaaacgcctgggtgatggcttctatgagcagaagctgatcaatgaccag
atcgcccagctgaccggcaagaaattcctggatggctacaccaatgcggaagcgcagtac
aaggccctgatggatagtggcgtggccagcgcagccagcttcaagctgactcccggcatt
gccctgagcgcagaccagatggcggcgctcaccagcgatatcgtctggatggtcgatacc
gaagtgaccctggccgacggcagtcgtcagcatgccctggtgcccacggtttacctggcc
catggcggcagcgccaccttgcaggccagcggagcgctcattggcggcagggatgtcacg
ctggccgctgataccgtcaacaacagcggtatcgtgcgcgccgaggacaagctggcggtg
gccgcccgcgatatcaataataccggcggtgagctgcgcggcgacaaggtggacgtgctg
gccaccgagaccctcaacatcgggaccgacttccagaactatggccggcagggcagcgtc
acgggccgccaggtcagcctggccgccaatgacatcaacatcatcggcgccaagatcaag
gccgacgatacgctcaagctggctgcccagaacaacctgaccatcgccgcggcaaccgcc
cagcacgatgtcaagctgacctggagcggcgccggtgagcgcgaagagaatcacggcatg
atgcgcaacggcggcgtcaccgcccagctgcaacaagccttgggcagcaccatcgaagcg
ggaggcgacgccagctttgcggctggccgcaatatcgccgtgcgcggctcttccatcgac
gtcaagggcaatgcagccctgctggccggtggttcggtcgaggtcagcgcggtcaagacc
gccaccgacagcgtggtcaccgggcgcagcgaccgctacgaccttaacgtggtggggcac
acggaaaaccttaccaccagccagatcgctgccggcaagggcctgagcatcgtcgccagc
ggtcagaatggcagtggtgatatcaccctggccgccagccgcctgtcgagcaaggaaggt
gaagtgaccctcaatgcagcaggcgacatcagcatcggcgcgatgcagaagaacaacgat
aaccgcatcgacgaacgcggcggcaaggcgtggatgaagacccacgatagttcttccgtg
gccgccggcagcctgatcgaaggggagaagggtgtcaacctcattgccaccggacgcagc
gacgccaaggtcagcgtggcgggcagcgatatctacagcaacggcaccatcgccatccag
gccaagggcgatgtcaccgtggcggagacccgttccagttccgatgaatggcagcaggcg
cattcggagagtagaggcttcctctcgcgcagttcttccgaccggaccgaccaggtgcgc
caggatatggccaacggcagtaccctcagcggcaacaaggtggtcatcgatgccggcagg
aacatcgccgtgcgcggcagtgaggtggtctccaccgagctgacctcgctgcgtgcagcc
aatgacgtgagtatcaccaccacgcagaacttcaccgaacagtcccattacaaggaggat
cgcaaatccggcctgatgggcgctggctttggcatcagcatcggcagccagggccagatg
gccaacggcaatggatccagcgtgaccaacaacgccagcaccgtgggcagcgtcaacggc
aacgtcaatatcatcgccggcaatgccttccgccagatcggcagccaggtggtggcgccc
cagggggatatcaacatcctggccaagtcggtcgatatcggtgcggcctacgatgcctcg
gtctatacgcaggaaaacaagttcaagcagagcgggctgaccctggccatcaacagtccg
gtgatttcggtactgcagaccggccagcagctcatccaggccggtcagaagactcccgac
aagcgcatgcaggcactggccgcagcgaccctggccaagaacgcctatgacgctggcgcc
gcgctgatcgacaagccgaccgacacgagcggagtcaagatcacgctgagcctgggcagt
tcgcagagcagcaacaaggtcacgcaggcttccagtcaggccgtggggagtaccgtggct
gctggtggtgcggtcaatatcgtcgcctccggcggtccgcgcagcgatatcaatgtggta
ggcagcgccatcagtgccggcggcgacgtcagcctggtggccgaccacgagatcaatctg
ttggcggcccagagcgcctacagccagcatggcaacaacaacagcagtggcgccagcatc
ggcatcggctttgccatgggcggcagccagaacggattcaccttggaactgggggccaat
cgggcgcgcggcaacctggatggcgacgacctcgtcaacaaggccagcaccatcagcgcc
ggcaaccaggccagcctgatttcgggcggcgacaccaacgtgcgcggctctacggtcagc
gccaagacggtcgcggcggccatcggcggcgacctcaatattgagagcctgcaagacaag
agcacctacggcagcaaacagagcagtgcaggcgtggggctaagcttatgcattccgccg
ttctgctatggcgccagttcggtcagcggcagcctctccggttccaaggcgaaaggggat
taccagagtgtggtgacgcaggcgggaatcaaggcgggtgatggtggcttccgcctggtg
gtcgctggcaataccgatctgaagggggcggtcatctccagtaccgccaaggcgatcgaa
gacggcaagaatttcttgcagactggtacgctgacctacagcgatatcagcaaccacgat
gcctacgaagccagcggctattccgtcagcggttcgatgagcagccagttgggtgaccag
agcaaagccaagacagaagccgacaaggcagcagccaattcacgtaccggccctggcggc
agcccagggtactccgataccggcggcagccagtccagcgtgacgcgctcaggaatcagc
ggcggtaccgtcatcatcaccgatgaacaaggtcagaaagccgccaccggtcagagcgcc
gaacagatcctggcgtcgctcaatcgcgatgtcgattccagcaaggattccagtggagcc
ttgagcaaggcatgggatggtgaggccttgcgtcagcaggtggaagcggaagcgcagatc
cggcaggcatttggtcagaccgttgccaagtccattggcgactatgccgataccaaggaa
agagacctcaagaacgccgccaagcaggccgagcaggatggcgatgcggagcaggcagcg
aaactgcgcgcagaagctgcccgttggggggaggacggcaccgctcgagctgccgtgcac
gctgccgccggcgcgctctccggaggactggccggggccgccagcgcggctgcggtcagc
aagctcatgccctcgctggcggagcagatcaagaagatgggcttgccctctgaactggag
ggcgtggtcgccgctgccgcagcaagcgggttgggagcgatcattggcggaagcgccggc
gccgccactgcggtcaccgtcgatttgaacaaccgccagttgcatcaatccgagcgtgct
ctgctggccaagctggccaaggaaaaagctgcggctgtctgcggccaggatgctgactgc
acgacgcggcaaaccttgttctggtcggacatgctggagcgggtggccaatggcaaggtc
gataatgtcgaggccgccaagaacatggactatctcgccaagctggccaatgcatcggcg
gcgccggacagcgagggggcacgcggtgggctggaagcctacctcaatgcctggcgcagc
gccgaggcattgttgcagccttatgtcggaacacccatcgtgaccaacggagttcccgcc
tttggcgacgggtcggcacagacctatttctctgcaaccgaagcgcagcgtagcgaccgt
ttcttgaataccttcctgggcagtttccctgacccgctcgcggcggggcgtccagaacgc
gacgctgatcgcgtggaccgcttcctggcgcagaacggaagtgcgctgaaagattacttc
tttgaagagaacctccttggaggaaaacttgctgccaagaccctggggctgttgggtcgt
ttgctgggcaacgagactgacctgttctttgcggggacggtcagtccctcggccaaaggt
tacattggtgtcggcaaggtgacgatggaaggttattcggtgaaactgagcaatgctgaa
atgtcgctgcttcagcaaatcgataagctggaaaccaccaaggcacaaggcgaattgaga
gagatggtttcggatttttatttttctcggaatggatacaagagttttgatggaaaatgc
ggagtgaattgtttcgatggcgtctatctcaagggcaacaccgtatttattaacgaggtc
aagcctttgtccaacaacggttcgatctcccttaacggagatacgccaggactaccgaca
cagatgaccgatgcctggatcaggaatgcagcggatcgccttgaacagaccggaagaagc
gacgcgattaagacagcggaaatgatccggagcgcattgagtgacggcagactggttaag
gtcgtgactgcggtcgattccaagagcatcacacttatcaagcttgcgagagactag
DBGET
integrated database retrieval system
