Herbaspirillum seropedicae SmR1: Hsero_1370
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Entry
Hsero_1370 CDS
T01268
Name
(GenBank) transcription regulator protein
KO
K22104
GntR family transcriptional regulator, sialic acid-inducible nan operon repressor
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hse03000
]
Hsero_1370
Transcription factors [BR:
hse03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Hsero_1370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
FadR_C
TrmB
LexA_DNA_bind
HTH_IclR
HTH_12
HTH_Crp_2
Ribosomal_S19e
HTH_24
HTH_41
Motif
Other DBs
NCBI-ProteinID:
ADJ62886
UniProt:
D8IP66
LinkDB
All DBs
Position
1566190..1566897
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AA seq
235 aa
AA seq
DB search
MPEQIQRRKLYQEVLERLMNRIHQGEFPAGSQLPSERDLMEQYGVGRPAVREALQAMERS
GFVEIAHGERARVVDPTAERLIAQIAAGAQHLLRTKPDMLQHLKEARVFLETSTARMAAA
RATPEQIERLRQTVTVHRASMVDLGEFIERDMAFHREIADISGNPIFPSIVESLFRWASE
FYTPMVRAPGAEELTLAEHTRIVDAIAAGDGDAAAEAMRVHLVRANELYRRLGQQ
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacagatacagcgacgcaagttataccaggaagtactggaacgcctgatgaac
cgtatccaccagggtgaattcccggcggggtcgcagctgccttccgagcgtgacctgatg
gagcaatacggcgtgggtcggccggccgtacgcgaagccttgcaggccatggagcgctcc
ggcttcgtggagatcgcccacggcgagcgtgcacgggtggtcgatcccactgccgagcgc
ctgatcgcccagatcgccgccggtgcgcagcatctgctgcggaccaagccggacatgttg
cagcatctcaaggaggcgcgcgtcttcctggaaaccagcaccgcccgcatggccgccgcg
cgcgccacgccagagcagatcgagcgcttgcgccagaccgtgacggtgcatcgcgcctcg
atggtcgacctgggcgagttcatcgaacgcgacatggccttccaccgcgagattgccgac
atcagcggcaatcccatcttcccctccatcgtcgaatccctgttccgctgggccagtgag
ttctatacgcccatggtgcgtgcgccgggtgcggaagagctgaccctggccgaacatacg
cgcatcgtggacgccatcgccgctggtgacggcgacgccgccgccgaggcgatgcgcgta
cacctggtgcgggccaatgagctgtatcgcaggctggggcagcaatga
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