Herbaspirillum seropedicae SmR1: Hsero_1429
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Entry
Hsero_1429 CDS
T01268
Symbol
argF
Name
(GenBank) ornithine carbamoyltransferase protein
KO
K00611
ornithine carbamoyltransferase [EC:
2.1.3.3
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00220
Arginine biosynthesis
hse01100
Metabolic pathways
hse01110
Biosynthesis of secondary metabolites
hse01230
Biosynthesis of amino acids
Module
hse_M00844
Arginine biosynthesis, ornithine => arginine
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
Hsero_1429 (argF)
Enzymes [BR:
hse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.3 ornithine carbamoyltransferase
Hsero_1429 (argF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OTCace
OTCace_N
DUF7207
Motif
Other DBs
NCBI-ProteinID:
ADJ62945
UniProt:
D8IPC5
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All DBs
Position
complement(1641519..1642433)
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AA seq
304 aa
AA seq
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MAIKHYLQFSDFTLDEYEYVIERSRVIKRKFKNYEPHHTLADRTLVMVFEKNSTRTRLSF
EAGMHQMGGAAIYLNTRDSQLGRGEPVEDAAQVMSRMCDVIMIRTYGQEIIERFAKHSRV
PVINGLTNEQHPCQVLADVFTYIEHHGSIQGKIVAWVGDANNMLYSWLQAAEVFGFHVNV
STPKGYDIDPAQVSPGNKNYTFFADPADACQDADLVTTDVWTSMGFEAENNARLKAFDGW
IVDQAKMARAKKDALFMHCLPAHRGEEVAAEVIDGPQSVVWEEAENRLHVQKALLEYLVH
GRFD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcaaacactaccttcagttttccgactttacgcttgatgaatacgagtacgtg
atcgaacgttcccgtgtgatcaaacgtaagttcaagaattacgagccccatcacacgctg
gccgatcgtaccctggtgatggtgttcgaaaagaactcgacccgcacccgcctctccttc
gaggccggcatgcaccagatgggcggtgcggcgatctacctcaacacccgcgacagccag
ctcggccgtggcgaaccggtggaagatgcggcccaggtgatgtcgcgcatgtgcgacgtg
atcatgatccgtacctacggccaggagatcatcgagcgctttgccaagcattcgcgcgtg
ccggtcatcaacggcttgaccaacgagcagcatccctgccaggtgctggccgatgtgttc
acctacatcgaacaccacggcagcatccagggcaagatcgtggcctgggtcggtgacgcc
aacaacatgctctattcctggctgcaggcggccgaggtgtttggcttccacgtcaacgtc
tctacccccaagggctacgatatcgacccggcgcaggtctcgccgggcaacaagaactac
accttcttcgccgatccggccgacgcctgccaggatgccgacctggtcaccaccgacgtg
tggaccagcatgggcttcgaggccgagaacaatgcccgcctgaaagccttcgatggctgg
atcgtggaccaggccaagatggcgcgcgccaagaaggatgcgctattcatgcactgcctg
cccgcccaccgtggcgaggaagtggccgccgaagtgatcgacggcccgcaatcggtggtt
tgggaagaggcggaaaaccgcctgcacgtgcagaaggccctgctcgaatatctggtgcac
ggccgcttcgactaa
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