Herbaspirillum seropedicae SmR1: Hsero_1511
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Entry
Hsero_1511 CDS
T01268
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis transmembrane protein
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00860
Porphyrin metabolism
hse01100
Metabolic pathways
hse01240
Biosynthesis of cofactors
Module
hse_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Hsero_1511 (cobD)
Enzymes [BR:
hse01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
Hsero_1511 (cobD)
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Paralog
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Motif
Pfam:
CobD_Cbib
AmpE
Motif
Other DBs
NCBI-ProteinID:
ADJ63026
UniProt:
D8IPY0
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All DBs
Position
1732867..1733826
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AA seq
319 aa
AA seq
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MTFLSILFALLIEQLKPLRADNPVYASIKSFAATIEGWFNAGQVHHGRLGWVAMVGALTV
PVALVYWLLLHVSLVAAFAWNVLVVYLTLGFRHYSHYFTSIQLALNSGDEMTARALLAEW
TRQDTTGMDVSEISRIASERALITTHRHVFGVFFWFLMPVGPALAVMYRVAEYLSRAWNE
PDHMKFEAFGRFAAQAFYWIDWIPARLTAAAFAVVGNFEDAIYAWRNFASRWDDESAGII
LAAGGGAMGVRFGTEKEAAAGIILPADAATVDSMPEETDGLPGDTPSPRTLQSTVGLVWR
ALLLWMFLLLLLSVAVWMG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgacatttctttccattctctttgcgctgctcatcgaacaactcaaaccgctgcgcgca
gacaatcccgtttatgcatcgatcaagtctttcgcagcgaccatagaaggctggttcaat
gccggccaggttcatcatggccgcctgggctgggtggccatggtcggtgcgctgaccgtg
ccggtggcgctggtctactggctgctgttgcatgtgagcctggtggcggcgttcgcctgg
aacgtgctggtggtctatcttacgctgggttttcgtcactacagccattacttcacttcg
atccagctggccctcaacagcggcgatgaaatgaccgcccgcgccctgttggccgaatgg
acccggcaggatacgaccggcatggatgtgagtgaaatttcccgcatcgcctccgaacgc
gccctcatcacgacgcatcgtcacgtctttggcgtgttcttctggttcctgatgccggtt
ggcccggcgctggccgtgatgtatcgcgtggccgagtatctttcgcgcgcctggaatgag
cccgatcacatgaagttcgaagccttcggccgcttcgccgcccaggccttctactggatt
gactggatcccggcgcgcctgaccgccgccgcctttgccgtggtgggcaacttcgaagac
gccatctatgcctggcgcaacttcgccagccgttgggatgacgagagcgccggcatcatc
ctggccgctggcggcggcgccatgggtgtgcgcttcggcaccgagaaggaagccgcagcc
ggcatcatcctgccggccgatgccgccacggtcgactccatgcccgaggaaaccgacggc
ctgcccggcgacaccccctcgccgcgcaccctgcagagcaccgtgggcctggtctggcgc
gccttgctgctatggatgttcctgctgctgctgctatcggtagcggtgtggatgggctag
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