Herbaspirillum seropedicae SmR1: Hsero_1529
Help
Entry
Hsero_1529 CDS
T01268
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hsero_1529
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_1529
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Hsero_1529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADJ63044
UniProt:
D8IPZ8
LinkDB
All DBs
Position
1759395..1761023
Genome browser
AA seq
542 aa
AA seq
DB search
MVLASQPPSRKRRDLLLFTPLAATLSASPWHAALAHGDEAGHAHGDIAHAGKDMLTVVGP
WELTGLDPTRSGYMFARMEVLETLLEVDDAGQLQPSVASAWSVSADGLQWRFVLRSGLRY
HDGSALTPASILACLQRAQARPGVLRLADIAALRVEGQTLVVVLRRPFGPLPYLLTHYTT
QILAPASFDAQGNVVAIIGSGPFRIRSIALPQQFEVERVAGSVSGSGAGSDVGKVVQRAR
YISVSRAETRTLLVQSGQADLAFSLDPPSIRALQDSPRASLLSAMLPRTTLLKLNAGHPL
LADVRVRRAISLCIEREGIARALLRDPDLGATQLFPPSLARWHDAALAPLRTNLQQARSL
LDQAGWRPGSDGVRRRDGQRMALNLTTFVDRPELPLIATALQEEMRQIGMAVRVVIGNSS
DIPAGHRSGQLQMALAARNYGNLPDPVASLLQDFGPQGGDWGAMGWDNQEVPALLARLAA
TPADAAAKGNAERARIVALLQEQLPVIPVVWYRQTCAVSRRVRGASIDPFERSYRISSLQ
WT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggtcttggctagtcaaccaccttcgcgcaaacggcgcgatctgttgctcttcacgccg
ctggcggccacgctgtccgccagcccctggcacgcggcgctggcccatggggatgaggcc
ggtcatgcgcacggcgacatcgcacacgccggcaaggacatgctgaccgtggtggggccg
tgggagctgaccggactcgatcccacccgctcgggctacatgttcgcccgcatggaggtg
ctggaaaccttgctggaagtggacgatgccggccagctccagccctccgtggccagcgcc
tggagcgtcagcgccgacggtctgcaatggcgtttcgtcttgcgcagcgggctgcgctac
cacgacggctcggcgctcacgccggccagcatcctggcctgcctgcaacgggcgcaggcg
cgtccgggcgtgctgcgcctggccgatatcgccgccctccgtgtggaggggcagaccctg
gtggtcgtgctgcgccgtcccttcggtccgctgccttatctgctgacccattacaccacc
cagatcctggcgccggccagcttcgatgcgcagggcaatgtggtggccatcatcggcagc
ggccccttccgtatccgttccatcgccttgccgcagcagttcgaggtcgaacgggttgcg
ggcagcgtttctggcagcggggcgggcagcgatgtgggcaaggtggtccagcgtgcccgc
tacatcagcgtctcgcgtgcggagacgcgtacgttgctggtccagagcggccaggccgac
ctggccttctcgctggacccgcccagcatccgcgccctgcaggatagcccgcgcgccagc
ctgctctcggccatgctgccgcgtaccaccctcctcaagctcaatgccggccatccgctg
ctggccgatgtgcgggtgcgccgcgccatctccctgtgcatcgagcgcgagggcatcgcc
cgcgccttgctgcgcgatcccgacctgggcgctacgcaactctttccgccgtcgctggcg
cgctggcacgacgccgcactggcgcccttgcgcaccaacctgcagcaggcgcgcagcctg
ctggaccaggccggctggcggcctggcagtgatggcgtgcggcgtcgcgatggccagcgc
atggcgctgaacctgaccaccttcgtggatcgccctgagctgccgctcatcgccacggcc
ttgcaggaagagatgcgccagatcggcatggcggtgcgggtggtgatcggcaactccagc
gacatccccgccggccatcgcagcggccagttgcagatggcgctggccgcgcgcaactac
ggcaatctgcccgatccggtggccagcctcttgcaggactttggcccgcaaggcggcgac
tggggcgcgatgggctgggacaaccaggaagtgccggccctgctggcgcgccttgccgca
acgcccgctgacgccgccgccaagggcaacgccgagcgcgcacgcatcgtggcgctgctg
caagagcagttgccggtgatcccggtggtctggtatcgccagacctgcgccgtgagccgg
cgcgtacgcggcgccagcatcgatccctttgaacgcagttaccggatttcttcattgcaa
tggacctga
DBGET
integrated database retrieval system
