Herbaspirillum seropedicae SmR1: Hsero_1607
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Entry
Hsero_1607 CDS
T01268
Symbol
soxR
Name
(GenBank) transcription regulator protein
KO
K19591
MerR family transcriptional regulator, copper efflux regulator
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hse03000
]
Hsero_1607 (soxR)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
hse01504
]
Hsero_1607 (soxR)
Transcription factors [BR:
hse03000
]
Prokaryotic type
Helix-turn-helix
MerR family
Hsero_1607 (soxR)
Antimicrobial resistance genes [BR:
hse01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
Hsero_1607 (soxR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
4HB_KIF14
Spectrin_Dys-1
Motif
Other DBs
NCBI-ProteinID:
ADJ63120
UniProt:
D8IQ74
LinkDB
All DBs
Position
complement(1833793..1834218)
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AA seq
141 aa
AA seq
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MNIGEAASASGVSAKMIRHYEETGLIPRASRTDAGYRVYGQRDVHLLRFIRQARQLGFSM
AQVSDLIGLWLDQSRPSRKVKQLAQTHIAELEQRISELQGMKATLEQLVQGCHGDNRPDC
PILEALGGDADCCAVHGRHGD
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcggagaagcggccagcgcctcgggcgtctcggccaagatgatccgccactat
gaagagaccgggctcatcccccgcgccagccgcaccgatgcgggctatcgcgtctatggg
cagcgcgatgtgcacttgctgcgcttcatccggcaggcccgccagctgggcttttccatg
gcccaggtgagcgacctgatcggcctgtggctggaccagtcgcgccccagccgcaaggtc
aagcaactggcgcagacccacatcgccgaactggagcagcgcatcagtgaattgcagggt
atgaaagccacgctggaacagctggtgcagggttgccatggcgacaaccggcccgactgt
cccatcctcgaggcgctgggaggggatgcagactgttgtgctgtccacggcaggcacggc
gactga
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