KEGG   Herbaspirillum seropedicae SmR1: Hsero_1680
Entry
Hsero_1680        CDS       T01268                                 
Symbol
alkB
Name
(GenBank) DNA repair system specific for alkylated DNA repair protein
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
hse  Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:hse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hse03400]
    Hsero_1680 (alkB)
Enzymes [BR:hse01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     Hsero_1680 (alkB)
DNA repair and recombination proteins [BR:hse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    Hsero_1680 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 2OG-FeII_Oxy_3 DotM_C
Other DBs
NCBI-ProteinID: ADJ63193
UniProt: D8IQT2
LinkDB
Position
1902821..1903474
AA seq 217 aa
MTGDLFAGLERTPAVERITEGALLLRAFVDASEAAQLMRDIATVLAQSPLRHMQTPGGFR
MSVAMSNCGQYGWVTDRRGYRYQSLDPLSERDWPPMPASFLALAGRAAEAAGFAAFVPDA
CLVNRYEPGAKMSLHQDRNEIDMTQPIVSVSLGLPATFLFGGMERSDKAQRMRLDSGDVV
VWGGPARLAFHGVDTVRQAEHPLTGACRYNLTFRRAR
NT seq 654 nt   +upstreamnt  +downstreamnt
gtgactggcgatctgttcgccggcctggaacgcacgcccgcggtggaacgcatcaccgag
ggcgcgctcttgctgcgcgcctttgtcgatgccagcgaggccgcgcaactgatgcgggat
atcgccaccgtgctggcccagtcgcccctgcggcacatgcagacgccgggcggttttcgc
atgtcggtggccatgagcaattgcgggcagtacggttgggtgacggaccggcgtggctat
cgctaccagtcgctggaccccttgagcgagcgcgactggccgcccatgcccgcgtctttc
ctggccttggccggacgcgccgcagaggcggccggttttgcggcgttcgtgccggacgcc
tgcctggtcaaccgctatgaacccggcgccaagatgtcgctgcaccaggaccgcaatgaa
atcgacatgacccagcccattgtctcggtgtcgctgggtttgccggccaccttcctgttt
ggcggcatggagcgcagcgacaaggcgcaacgcatgcgcctggacagtggtgacgtggtg
gtctggggcggaccggcgcggttggctttccatggtgtcgatacggtgcggcaggcagag
catccgctcactggagcctgccgctacaacctgacttttcgtcgcgcgcgctga

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