Herbaspirillum seropedicae SmR1: Hsero_1843
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Entry
Hsero_1843 CDS
T01268
Symbol
ddpA
Name
(GenBank) ABC-type dipeptide transport system, periplasmic protein
KO
K13889
glutathione transport system substrate-binding protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_1843 (ddpA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_1843 (ddpA)
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Glutathione transporter
Hsero_1843 (ddpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
UreE_N
Motif
Other DBs
NCBI-ProteinID:
ADJ63353
UniProt:
D8IRM9
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All DBs
Position
2093168..2094739
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AA seq
523 aa
AA seq
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MSTTATHKGVSAAKWLAVAALGTTLQFAAAHAFAAKTVTLAVYSTFTTLDPYDANDTLSL
SMAKSFYQGLFGFDKDMKLIPVLAEGYLVSKDGLEYTIRLKQGVKFQDGTVFKADAVKAV
FDRVTNPDNKLKRYNLFNRIAKTEILNDYTVKVVLKEPFSAFINVLAHPSAVMISPTALK
QYGNKDIAFHPVGTGPFKFVEWKQTDYVKVAKFDGYWKPGYPKVDEIIWKPVVDNNARSA
MMQTGEAQFTYPLPYEQADLLKSKSNLDVVAAPSIIQRYMSMNTKQKPFDNPKVREAINY
AINKQALVKVAFNGYAVPMDGVVPQGVDYAYKTGPWPYDVKKAKALLAEAGYPNGFETEL
WSAYTHSTAVKIVQFLQQQLAQVGIKAKIQALEAGQRVERVESWQDPATAPVRLLYIGWS
SSTGEADWALRPLLASESFPPRLYNTAYYKNDKVDADIAKALTLTERKDKEALYKDAQQE
IWKDAPWAFLVTEKLLYARNKNLKGVYVMPDQAIEFENIELVK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccacagcaactcacaagggagtgtcggctgccaaatggctggctgtcgccgcc
ctgggtaccacgctgcagttcgccgcagcgcatgccttcgcggccaagaccgtgaccctg
gcggtctattcgaccttcaccacgctggacccgtatgacgccaacgacacgctctcgctg
tccatggccaagtccttctaccagggcctgttcggcttcgacaaggacatgaagctcatc
ccggtgctggccgaaggctacctggtcagcaaggatggcctggaatacaccatccgactc
aagcaaggcgtgaagttccaggatggcaccgtcttcaaggccgatgccgtcaaggccgtg
ttcgaccgcgtgaccaatccggacaacaagttgaagcgctacaacctcttcaaccgcatc
gccaagaccgagatcctgaacgactacaccgtcaaggtggtcctgaaggaaccgttctcg
gccttcatcaacgtgctggcgcacccgtctgcggtgatgatctcgccgaccgcgctcaag
cagtacggcaacaaggacatcgccttccacccggtgggcaccggtcccttcaagttcgtg
gaatggaagcagaccgactacgtcaaggtggccaagttcgacggctactggaagccgggc
tatcccaaggtcgatgagatcatctggaagccggtggtggacaacaacgcccgctcggcc
atgatgcagaccggcgaggcgcagttcacctatccgctgccctatgagcaggccgacctg
ttgaagagcaagtccaacctggatgtggtggccgcgccctcgatcatccagcgctacatg
tcgatgaacaccaagcagaagcccttcgacaaccccaaggtgcgcgaagccatcaactac
gccatcaacaagcaggcgctggtcaaggtggccttcaatggctacgccgtgccgatggac
ggtgtggtgccgcagggcgtggactatgcctacaagactggtccctggccctatgacgtg
aagaaggccaaggcgctgctggccgaggcgggctatccgaatggcttcgagaccgaactg
tggtcggcctatacccatagcacggcggtgaagatcgtccagttcctgcagcagcagctg
gcgcaggtgggcatcaaggccaagatccaggccctggaagccggccagcgcgtggaacgc
gtcgaaagctggcaagacccggccaccgcaccggtgcgcctgctctacatcggctggtcg
tcctccaccggtgaagccgactgggcgttgcgtccgctgctggcctcggaatccttcccg
ccgcgtctgtacaacaccgcctactacaagaatgacaaggtcgatgccgacatcgccaag
gcgctgaccctgaccgagcgcaaggacaaggaagccctgtacaaggacgcccagcaggaa
atctggaaggacgcaccctgggccttcctggtcaccgaaaaactgctctatgcgcgcaac
aagaacctcaagggcgtctatgtgatgcctgaccaggccatcgagttcgagaacatcgag
ctggtcaagtaa
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