Herbaspirillum seropedicae SmR1: Hsero_1857
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Entry
Hsero_1857 CDS
T01268
Symbol
pmbA
Name
(GenBank) Zn-dependent protease protein
KO
K03592
PmbA protein
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hse01002
]
Hsero_1857 (pmbA)
Peptidases and inhibitors [BR:
hse01002
]
Peptidases of unknown catalytic type
Family U62
Hsero_1857 (pmbA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PmbA_TldD_3rd
PmbA_TldD_2nd
PmbA_TldD_1st
Phage_TAC_7
DUF5608
Motif
Other DBs
NCBI-ProteinID:
ADJ63367
UniProt:
D8IRP3
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All DBs
Position
2105679..2107043
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AA seq
454 aa
AA seq
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MSDTPFTHSQDQLKQLAQDVLRYARDKGASDAAVDISEGSGLSVAVRKGKIETIEQNKDK
GIGVTVFLGEGRQVRRGNASTSDFSQQALKETVEAAYNIARFTSIDDCAGLPDAEMLEMA
PRDLKLFSPWNISAEEAVALAQRCETAALETDPRISNSEGAGVYVQHSHFIAANSRGFMG
GYPFSRHTISVAPIAGKGASMQRDDWYSSKRDPKKLAQPEAIGRYAAERALARLNARKLS
TRKCPVLFEAPLAAGLLGAFVQAVSGGALYRKSTFLLDSLGQQVFPEHIQILEDPHVIGG
VGSAPFDEEGVRTLKREVVRNGVVQGYFLSTYSARKLGMQTTGNSGGSHNLTLRSELTTR
ADTFKGMLKKMGTGLLVTELMGQGVNYVTGDYSRGASGYWVENGVIQYPVEEITIAGNMK
DMLRQIVAVGNDTLIRGTKETGSILLESMTIAGD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccccattcacgcacagtcaggaccagttgaagcagttggcgcaggatgtc
ctgcgttatgcccgtgacaagggcgcctcggacgccgccgtcgacatcagcgaaggcagc
ggcctctcggtagcggtgcgcaagggcaagatcgagaccatcgagcagaacaaggacaag
ggcatcggcgtgaccgtgttcctcggagaaggccgccaggtgcggcgcggcaatgccagc
acctcggatttctcgcagcaggccctgaaggaaacggtcgaggccgcctacaacattgcc
cgcttcacctccatcgatgactgcgccggcctgcccgatgccgagatgctggaaatggcg
ccgcgcgacctgaaattgttttcgccgtggaatatttccgccgaagaagctgtggcgctg
gcccaacgctgcgaaaccgctgcgctggagacggatccccgcatcagcaacagcgaaggc
gccggtgtctacgtgcaacactcgcatttcatcgccgccaacagccgtggtttcatgggc
ggctatcccttctcgcgccacaccatctcggtggcgccgatcgccggcaagggtgcgagc
atgcagcgcgacgactggtattcctccaagcgcgaccctaaaaagctggcccagcccgaa
gccatcggccgttacgccgccgagcgcgcgctggcgcgcctgaacgcacgcaagctgagc
acccgcaagtgcccggtgctgttcgaggcgccgctggcagcgggtctgctgggtgcattc
gtgcaggccgtctcgggtggtgcgctgtaccgtaaatcgactttcctgctggactccctg
ggccagcaggtgtttccggaacacatccagatcctggaagatccgcacgtcatcggtggc
gtcggctcggccccgttcgatgaagagggtgtgcgcacgctcaagcgcgaagtggtgcgc
aatggcgtggtgcagggttatttcctgtccacctattcggcccgcaagctgggcatgcag
accaccggcaactcgggcggttcgcacaacctcacgctgcgctcggagctgaccacccgc
gccgataccttcaagggcatgttgaagaagatgggcaccggcttgctggtgaccgagctg
atgggccagggcgtgaactacgtcaccggcgactattcgcgcggcgcttccggttactgg
gtcgagaatggcgtgatccagtatccggtggaagagatcaccattgccggtaacatgaag
gacatgctgcgccagatcgtggccgtaggtaacgacacgctcatccgcggcaccaaggaa
accggttccatcctgctggaaagcatgaccatcgcgggcgactga
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