Herbaspirillum seropedicae SmR1: Hsero_1869
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Entry
Hsero_1869 CDS
T01268
Name
(GenBank) signal peptide protein
KO
K03646
colicin import membrane protein
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_1869
Transporters [BR:
hse02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Hsero_1869
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cds6_C
TPR_17
TPR_11
TPR_2
TPR_1
TPR_14
DUF4440
TPR_8
SnoaL_3
Extensin_1
Fis1_TPR_C
Wzy_C_2
HC2
TPR_10
TPR_7
S4_2
TPR_6
Motif
Other DBs
NCBI-ProteinID:
ADJ63378
UniProt:
D8IRQ4
LinkDB
All DBs
Position
complement(2119256..2120875)
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AA seq
539 aa
AA seq
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MAPESQEQTPIHGLRDLISKTAHKTAVMSSLVAALFAAPASLAHASEMSDINKLMRAGQY
AEALTKTDAVLAKHPRDAQLRFTKGLILAEQNRSAEAIAVFTKLTEDFPDLPEPYNNLAV
LYAADGQYDKARAALDMAMRTNPTYATALENLGDVYAKLASQAYDKALQIDPGANVPQPK
LTLLRSLNGNTTGGTVPRLASAAAAQREAKAKAEASAAEQQQRAKALAAEKLAQQAAADK
AEAEKNAISKATSEKEKAAADKAAAEKAAADKAAADKAAADKAAADKAAADKAAADKAAA
DKAAAEKAAADKAAAEKARAEKARAEQLAAEQARAQKAAAEKAAAEQKQKELLAQKDKEQ
AEKLAREQAARAEKEKAAQAAADKAKADKLAAAEKAKADKLAAAEKAKADKARADKEKAK
EQASAEQDKTAVLAALNGWAKAWSDKDVRGYLGHYASDFDTPKGASRKEWAEERRARIED
KGRISVKVSNATVSINGNTATVRYRQIYNSDRLTVDSRKTLIFVKQGNRWLIKQERSGG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggccccagaatcacaagaacagacacccattcatggtttgcgcgatctgatcagcaaa
actgcccataagacggcagtgatgtccagcctggtggccgccctcttcgcggcgcccgcc
agcctcgcgcatgccagtgaaatgtctgacatcaacaagctgatgcgggccggacaatat
gccgaagcgctgaccaagaccgatgccgtgctggcgaaacacccgcgcgatgcgcaactg
cgtttcacgaagggcctgatcttagcagaacaaaaccgttctgccgaggccatcgcggta
ttcaccaagctgaccgaagatttccctgacctgcccgagccctacaacaacctggccgtg
ctgtacgcggccgatggccagtacgacaaggcccgggcggcgctggacatggccatgcgc
accaacccgacctatgccaccgcgctggaaaacctgggcgacgtctacgccaagctggcc
agccaggcctatgacaaggccttgcagatcgacccgggcgccaatgtgccgcaacccaag
ctgacgctgctgcgttcgctcaacggcaacaccaccggtggcaccgtgccgcgcctggcc
tcggcagcggccgcccagcgcgaagccaaggccaaggccgaagccagcgccgccgaacag
cagcagcgcgccaaggccctggcagccgaaaagctggcccagcaggccgctgccgacaag
gccgaggccgagaagaacgccatctccaaggccaccagcgagaaggaaaaggccgctgcc
gacaaggctgcagcggagaaagccgccgccgacaaggctgcagccgacaaggctgcagcc
gacaaggctgcagccgacaaggctgcagccgacaaggctgcagccgacaaggctgcagcc
gacaaggcagcggccgaaaaagccgctgcagacaaggctgccgccgagaaggcccgggcc
gagaaggcgcgcgccgagcagctcgcagccgaacaggcgcgtgcgcaaaaggcggctgcc
gagaaggccgccgccgagcagaagcagaaggaactgctagcccagaaggacaaggaacag
gccgagaagctggcccgcgagcaggccgcccgcgccgagaaggaaaaggccgcccaggct
gccgccgacaaggccaaggccgacaagctggccgccgcagagaaggccaaagccgacaag
ctggccgcggccgaaaaggccaaggcggacaaggcccgcgccgacaaggaaaaggccaag
gagcaagccagcgccgagcaggacaagacggccgtgctggctgccttgaatggctgggcc
aaggcctggagcgacaaggatgtgcgtggctacctgggccactacgccagcgacttcgac
acccccaagggcgcctcccgcaaggaatgggccgaagagcgccgcgcccgtatcgaagac
aagggtcgcatcagtgtcaaggtcagcaatgccacggtgagcatcaatggcaacaccgcc
accgtgcgttatcgccagatatataattcggatcgactaacggtagacagccgcaagacc
ctgatcttcgtaaaacagggcaatcgatggctgatcaaacaggaacgatcgggagggtaa
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