Herbaspirillum seropedicae SmR1: Hsero_1938
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Entry
Hsero_1938 CDS
T01268
Symbol
recO
Name
(GenBank) DNA repair protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Hsero_1938 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hse03400
]
Hsero_1938 (recO)
DNA repair and recombination proteins [BR:
hse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Hsero_1938 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Hsero_1938 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
ADJ63446
UniProt:
D8ISA2
LinkDB
All DBs
Position
2195098..2195958
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AA seq
286 aa
AA seq
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MTTMLTESQLDSQADPANAVAPAVAPQAPAKTPARKTAAPRARSRAVPEKEHKVLAQPGF
VLHSYPYKETSLIIDVFSRDHGRVALVAKGAKRPHSKLRGALQTFQPLSLSWSGKSEVRT
LTDAEWVGGLLPLEKSALLCGFYLNELLVKLLAREDAHPALFDHYVATLNKLAHGENAPI
VLRQFERILLKQTGVAGNWSHCVVSGKTVRPDLIYVVDPEQGTRPERLSDRAPKVSGKTL
LDMEREDYSDPTTQLQSKFLMRYLLAHHLGGAQLNTRQILIDLMQL
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccatgctcaccgaatcccagctcgacagccaggctgacccggccaacgccgta
gcgccggcggtcgcgccgcaggcgccggccaagacgcctgcgcgcaagacggccgccccg
cgtgcgcgcagccgcgccgtgccagagaaggagcacaaggtcctggcgcagccgggcttc
gtgctgcacagctatccctacaaggaaaccagcctcatcatcgacgtcttctcgcgtgat
catggtcgcgtggcgctggtggccaagggcgccaagcgcccgcattccaagctgcgcgga
gctttgcagaccttccagccgctctcgctgtcgtggagcggcaagtccgaagtgcgcacg
ctgaccgacgctgaatgggtcggcggcctgctgccgctggaaaagtccgccttgctgtgc
ggcttctacctcaatgaattgctggtcaagctgctggcgcgcgaagatgcacacccggcg
ctgttcgaccattacgtggccacgctcaacaagctggcccacggcgagaatgcccccatc
gtgctgcgccagttcgaacgcatcctgttgaagcagaccggcgtggccggcaactggagc
cattgcgtggtcagcggcaagaccgtgcggcccgatctcatctacgtggtcgacccggag
cagggcacccgtcccgagcgcctgtccgaccgcgcccccaaggtcagcggcaagaccctg
ctggacatggagcgcgaggactacagcgatcccaccacgcaactgcagagcaagttcctc
atgcgctacctgctggcgcaccatctgggcggggcgcagttgaatacgcgccagatcctg
atcgacctcatgcaattgtga
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