Herbaspirillum seropedicae SmR1: Hsero_1982
Help
Entry
Hsero_1982 CDS
T01268
Symbol
pheT
Name
(GenBank) phenylalanyl-tRNA synthetase beta chain protein
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Hsero_1982 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hse01007
]
Hsero_1982 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hse03016
]
Hsero_1982 (pheT)
Enzymes [BR:
hse01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Hsero_1982 (pheT)
Amino acid related enzymes [BR:
hse01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Hsero_1982 (pheT)
Transfer RNA biogenesis [BR:
hse03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Hsero_1982 (pheT)
Prokaryotic type
Hsero_1982 (pheT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
ADJ63483
UniProt:
D8ISD9
LinkDB
All DBs
Position
2238959..2241385
Genome browser
AA seq
808 aa
AA seq
DB search
MQFSENWLRTMVNPTMTSDELSHLLTMSGLEVEEVEPVAPPFTNVVVGEVLEVAKHPDAD
RLNVCRVNVHTGTILNIVCGAPNVRAGLKVPCAMVGAVLPPGPDGKPFEIKVGKLRGVES
QGMLCSARELKLSEDHGGLLELPDDAPVGQNFRDYLQLNDLKFTIKLTPNKADCLSVLGV
AREVSALTGTPLKAPTFQSAAVNLDEKLPVRISAPDLCGRFAGRVIRGLNAKAATPQWMK
QRLERSGQRPISALVDISNYVMLELGRPSHVFDLDKIHGSLDVRWGRKGESLKLLNGNTV
EVDEWVGVISDDKELESLAGIMGGDATAVSLDTTNIYLEAAFWFPQAIQGRARRYNFSTD
AAHRFERGVDFATVVDHIERITALLLEICGTAETRVGPVDDQIVNLPKRAPVQLRTARAA
KVIGVEITDEMVSDIFKRLGLSFDYQPGLFSVTPPSYRFDIEIEEDLIEEVARVYGFENI
PALPPVAAHAMRIAPENTRSLFAIRRLLADQDYQEVVNFSFVESAWEADFAGNTDPIKLL
NPIASQMSVMRSSLIAGLVANARYNVNRKAARIRVFEVGAVFSKNAAVADGPLAVAGFDQ
PKRVAALAYGPVAEEQWGQASRNVDYFDVKADLEALFAPRTLRFVKSEHPALHPGRTAQV
LLGEQVIGVIGELHPKWQQKYDLPLAPVVFEVDADALQQRDLPTYAEISKFPAVSRDIAL
VVKQSVGAQQLMDVFAAEKQANPACQILQALVLFDEYQGRGLESDEKSLAFRCTLQDTQN
TLQDDKVDLAMNALVAAASAKLGARLRA
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctctgaaaactggctgcgtaccatggtcaatccgaccatgacctcggatgaa
ctgtcgcatctgctgaccatgtccggcctggaagtcgaggaagtcgaaccggtcgcgcct
cccttcaccaatgtggtggtgggcgaggtgctggaagtggccaagcatcccgatgcggat
cgcctcaacgtctgccgcgtcaacgtgcataccggcaccatcctcaacatcgtctgcggc
gcacccaatgtgcgtgccggcctgaaggtgccttgcgccatggtcggcgccgtgctgccg
ccgggccccgatggcaagcccttcgagatcaaggtcggcaagctgcgcggtgtggaatcg
cagggcatgctgtgctcggcgcgcgagctgaagctgtcggaagatcatggcggcctgctg
gagctgcccgacgatgcgccggtgggccagaatttccgtgactacctgcagttgaatgac
ctcaagttcactatcaagctcacccccaacaaggcggattgcctgtcggtgctgggcgtg
gcgcgtgaagtctcggccctgaccggcaccccgctgaaggccccgaccttccagtcggcc
gccgtcaacctggatgagaaactgccggtgcgcatttccgcgcccgacctgtgcggccgt
ttcgccggtcgtgtcatccgtggcctcaacgccaaggccgccaccccgcaatggatgaag
cagcgtctggaacgcagcggccagcgcccgatctcggcgctggtggacatttccaactac
gtcatgctggagctgggacgtccctcccacgtgttcgatctcgacaagatccacggcagc
ctggatgtgcgctggggtcgcaagggcgagtccttgaagctcttgaacggcaataccgtg
gaagtcgatgaatgggtcggcgtgatctcggacgacaaggagctcgaatccctggccggc
atcatggggggcgacgctaccgccgtctcgctggacaccaccaacatctacctggaagcg
gccttctggttcccgcaggccatccaggggcgcgcccgccgctacaacttctccaccgat
gccgcccaccgcttcgagcgcggcgtcgacttcgccaccgtggtcgatcacatcgaacgc
atcaccgcgctgttgctggaaatctgcggcaccgccgagacccgtgtgggtccggtggac
gaccagatcgtcaacctgcccaagcgcgcgccggtgcaactgcgcaccgcccgtgcggcc
aaggtcattggcgtggagatcaccgatgagatggtctccgacatcttcaagcgcctgggc
ctgtccttcgactaccagccgggcctgttctcggtgacgccgccgtcctatcgcttcgac
atcgagatcgaagaagacctgatcgaagaagtcgcccgcgtctacggtttcgagaacata
ccggcactgccgccggtggccgcccatgccatgcgcatcgcgcccgagaacacccgttcg
ctgttcgccatccgtcgcctgctggccgaccaggattaccaggaagtggtcaacttcagc
ttcgtggaaagcgcctgggaagccgacttcgcgggcaataccgatcccatcaagctgttg
aacccgatcgccagccagatgagcgtgatgcgctcttcgctcatcgccggcctggtcgcc
aacgcacgctataacgtcaaccgcaaggcggcgcgtattcgcgtcttcgaagtcggtgcg
gtattcagcaagaacgccgccgtggccgatggtccgctggccgtggccggtttcgaccag
cccaagcgcgtggcggccctggcctatggtccggtcgccgaggagcaatgggggcaggcg
agtcgcaacgtcgattacttcgatgtgaaggccgacctggaagccttgttcgcgccgcgc
accctgcgcttcgtcaagagcgagcatccggccctgcatccggggcgcacggcccaggtg
ctgctgggtgagcaggtcatcggcgtgatcggcgaactgcatcccaagtggcagcagaag
tacgacctgccactggcgccggtggtcttcgaagtcgatgctgatgcattgcagcagcgc
gacctgccgacctatgccgagatttccaagttcccagccgtgagccgcgatatcgccctg
gtggtcaagcagtccgtgggggcgcagcagctcatggatgtcttcgccgccgaaaagcaa
gccaatccggcctgccagattttgcaagcccttgttttatttgatgaatatcaaggccgc
ggactggagagtgacgaaaaaagccttgcgttccgctgcaccttgcaagatactcaaaac
acccttcaggatgacaaggttgaccttgcgatgaatgcactggtggccgctgcgagcgcc
aagctcggcgccagactgcgtgcctga
DBGET
integrated database retrieval system
