Herbaspirillum seropedicae SmR1: Hsero_2029
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Entry
Hsero_2029 CDS
T01268
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon (sigma-F factor) protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02020
Two-component system
hse02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hsero_2029 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Hsero_2029 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hse03021
]
Hsero_2029 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hse02035
]
Hsero_2029 (fliA)
Transcription machinery [BR:
hse03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Hsero_2029 (fliA)
Bacterial motility proteins [BR:
hse02035
]
Flagellar system
Flagellar assembly proteins
Stator
Hsero_2029 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0154
wHTH-PRTase_assc
SLATT_5
UPF0122
MarR
Motif
Other DBs
NCBI-ProteinID:
ADJ63529
UniProt:
D8ISX0
LinkDB
All DBs
Position
2294459..2295193
Genome browser
AA seq
244 aa
AA seq
DB search
MYNVKGKKGKNDLLEQHAPLVKKLAHQLKAKLPPSVEVDDLIQAGMMGLLDAVNRYEETH
GAQFETYAVQRIRGAMLDELRSSDWLPRSIRQNARKVEEAMQTLLQQLGRQPKEAELAQH
MQISLEDYQSLLSECGGHQLIYYEDFHDDDGGHEHFLDRHQTSDSDDPLQNLINGGFREA
VVDSIKALPEREQILMALYYEQEMNLKEIGAVMGVSESRVCQLHSQAISRMRSYLREHSW
SGVA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgtcaagggaaaaaaaggcaagaacgatttgctggagcagcatgcgccgctg
gtgaagaagctggcgcatcagctcaaggcaaagttgcctcccagcgtggaggtggacgac
ctcatccaggccggcatgatgggcctgctcgacgccgtcaaccgctacgaggaaacccat
ggcgcgcagttcgagacctatgccgtgcaacgtatccgcggcgccatgctcgatgagctg
cgcagcagcgactggctgccgcgcagcatccgccagaacgcccgcaaggtcgaagaagcc
atgcagacgctgctgcagcaactgggccggcagccgaaggaagccgaactggcgcagcac
atgcagatcagcctggaggactaccagtccctgctgagtgagtgtggcggccatcagttg
atctactacgaagatttccatgacgacgatggcggccacgagcacttcctggaccgtcac
cagacctcggactccgacgatcctctacagaacctgatcaatggcggcttccgcgaagca
gtggtggattcgatcaaggcgctgcccgagcgcgagcagatcctgatggcgctgtattac
gagcaggagatgaatctcaaggaaatcggcgccgtcatgggcgtgtccgagtcgcgcgtc
tgccagctgcacagccaggccatttcgcgcatgcgctcctatctgcgcgagcattcctgg
agcggcgtggcctga
DBGET
integrated database retrieval system
