Herbaspirillum seropedicae SmR1: Hsero_2045
Help
Entry
Hsero_2045 CDS
T01268
Name
(GenBank) ABC-type antimicrobial peptide transport system, ATPase component protein
KO
K05685
macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_2045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_2045
Transporters [BR:
hse02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
Hsero_2045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MacB_PCD
ABC_tran
FtsX
AAA_21
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
DUF4396
MMR_HSR1
AAA_23
AAA_25
AAA_22
AAA_28
DUF87
Motif
Other DBs
NCBI-ProteinID:
ADJ63545
UniProt:
D8ISY6
LinkDB
All DBs
Position
complement(2309877..2311850)
Genome browser
AA seq
657 aa
AA seq
DB search
MRTPLLQLRGLRRDFPAGDEKITVLNDVNLDIHAGELVAIVGASGSGKSTLMNILGCLDK
PSAGSYLVAGRETGKLDADELAQLRREHFGFIFQRYHLLSDLDATANVEVPSVYAGLEPL
QRRQRAGELLARLGLAERSHHKPGQLSGGQQQRVSIARALMNGGDVILADEPTGALDSHS
GQEVIKILKELHAEGHTIIIVTHDMQVASHAQRIIEIKDGVIIADRRNEETVPALATTAS
NNTGASARQGRQARPWRAWLDRFKEALRMSLLAMNAHRLRSFLTMLGIIIGIASVVSVVA
LGSGSREQILADISAMGTNTIDIFPGADFGDMKSASIRTLTPADAAALAEQNFVDSVTPS
VATSSSARYGNISVTATINGVGEQYFRVRGLKMAQGKSFDTEGIRRYAQEVVIDANSYKK
LFPDGGNALGEVIFLGSVPCRIIGVTQKRENGFGNNNALNVWVPYTTAMSRVIGQRHLSG
ITVRVNDQVPSAAAEQGIVELMTLRHRTKDFYLFNTDSIRQTVEKATATLTLLVSMIALI
SLVVGGIGVMNIMLVSVTERTREIGVRMAVGARQSDIMQQFLIEAVLVCLAGGLLGVLLA
LSFGALFSHFVSSFRMIYSTASIVSAFACSTLIGVVFGFLPARNAARLNPVDALARE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactcccctgttacagctgcgtggcctgcggcgcgactttccggctggcgatgag
aagatcaccgtcctcaatgacgtcaacctggacatccatgccggcgaactggtggccatc
gtcggcgcgtccggttcgggcaagtccacgctgatgaacatcctgggctgcctggacaag
cccagcgccggcagctatctcgtcgctggccgcgagaccggcaagctcgatgcggatgaa
ctggcgcagttgcggcgcgagcatttcggcttcatcttccagcgctatcatctgctgtcg
gacctggacgccaccgccaacgtcgaagtcccctcggtctacgccggcctggagccgctg
cagcgccgccagcgcgccggggaactgctggcccggctagggctggccgagcgcagccat
cacaagcccgggcaattatcaggtgggcagcagcagcgcgtctcgattgcgcgcgcgctg
atgaacggcggcgacgtcatcctggccgacgagcccaccggtgcgctggacagccacagc
gggcaggaagtcatcaagatcctcaaggaactgcatgccgagggccacaccatcatcatc
gtcacgcacgacatgcaggtggccagccacgcccagcgcatcatcgagatcaaggacggc
gtcatcatcgccgaccgccgcaacgaggagacggtccctgccctcgctaccacggccagc
aacaataccggcgcctctgcccggcaaggccgccaggcccgtccctggcgcgcctggctg
gaccgcttcaaggaagcgctgcgcatgtcgctcctggccatgaatgcgcaccgcctgcgc
agcttcctgaccatgctgggcatcatcatcgggatcgcctcggtggtctcggtggtagcc
ctgggcagcggctcgcgcgagcagatcctggccgacatcagcgcgatgggcaccaatacc
atcgacatctttccgggcgccgatttcggcgacatgaagtcggcctccatccgcaccctc
acgcccgccgacgctgcggcgctggccgagcagaacttcgtggacagcgtcacgcccagc
gtggccacgtcatcctcggcccggtacggcaacatctccgtgaccgccaccatcaacggc
gtgggcgaacaatacttccgggtgcgcggcctgaagatggcgcaaggcaagagcttcgat
accgagggcatccgccgctacgcccaggaagtggtgatcgatgccaacagctacaagaag
ctcttccccgacggcggcaacgccctgggcgaagtgatcttcctgggcagcgtcccctgc
cgcatcatcggtgtgacgcaaaagcgcgagaacggctttggcaacaacaatgccctcaat
gtctgggtcccctacaccaccgccatgagccgcgtgatcggccagcgccacctcagcggc
atcaccgtgcgcgtgaatgatcaggtgcccagcgccgcggccgagcaaggcatcgtcgag
ctgatgacgttgcgccatcgcaccaaggatttctacctcttcaacaccgacagcatccgc
cagacggtcgagaaagccaccgccacgctgaccttgctggtgtcgatgatcgccctgatc
tcgctggtggtgggcggcatcggcgtgatgaacatcatgctggtctcggtgaccgaacgc
acccgcgagatcggtgtgcgcatggccgtgggagcgcgccagagcgacatcatgcaacag
ttcctgatcgaagccgtgctggtctgcctggctggtggcctgctgggcgtgttgctggcg
ctgtccttcggcgccctgttctcgcatttcgtcagcagcttccgcatgatctactccacg
gcgtccatcgtcagcgccttcgcctgctcaaccctgatcggcgtagtctttggcttcctg
ccggcgcgcaacgcggcgcgcttgaatccggtcgacgccctggcccgcgaatga
DBGET
integrated database retrieval system
