Herbaspirillum seropedicae SmR1: Hsero_2151
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Entry
Hsero_2151 CDS
T01268
Symbol
radA
Name
(GenBank) ATP-dependent serine protease protein
KO
K04485
DNA repair protein RadA/Sms
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hse03400
]
Hsero_2151 (radA)
DNA repair and recombination proteins [BR:
hse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Hsero_2151 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
DUF7125
Lon_C
AAA_22
GvpD_P-loop
ChlI
AAA_24
AAA_16
SLFN-g3_helicase
RecA_N
AAA
AAA_14
CobU
nSTAND3
nSTAND_NTPase5
ATPase_2
NTPase_1
AAA_5
DUF7129
AAA_29
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ADJ63650
UniProt:
D8IT91
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Position
2416063..2417448
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AA seq
461 aa
AA seq
DB search
MAKVKTNYTCTECGGVSNKWAGQCPACGQWNTLVETLVEPAGGNRYSNSPQSLAQTAPVL
SLADIEAIDVPRFGTGIEEFDRVLGGGLVPGGVALIGGDPGIGKSTLLLQALANISRLKK
VLYVSGEESGAQIALRAKRLAVDARELQLQAEIQLEKILATLAEHKPEVAVIDSIQTLYS
DALTSAPGSVAQVRECAAQLTRVAKTSGITIIMVGHVTKEGALAGPRVLEHIVDTVLYFE
GDTHSSFRLVRAFKNRFGAVNELGVFAMTEKGLKGVSNPSALFLSQHENQVPGSCVMVTQ
EGTRPLLVEIQALVDSSHVPNARRLSVGLEQNRLAMLLAVLHRHAGVAAFDQDVFINAVG
GVKITEPAADLAVLLAINSSMRNKPLPRGLVVFGEVGLAGEIRPAPRGQERLREAAKLGF
SIAVIPKANAPKQAIEGLKVIAVERIDDALQKAREIDDHAS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggtcaagaccaattacacctgcaccgaatgcggtggcgtcagcaacaaatgg
gccggtcagtgcccggcctgcgggcagtggaataccctggtcgagaccctggtggagccg
gcgggcggcaaccgttattccaattcgccgcaaagcctggcgcagactgcaccggtgctg
agcctggccgacatcgaggccatcgatgtgccgcgctttggcaccggcatcgaggaattc
gaccgggtactgggcggcggcctggtgccgggtggtgtggcgctgatcgggggggatccc
ggcatcggcaagtcgaccctgctgctgcaggcgctggccaatatctcccggctcaagaag
gtgctctacgtcagcggcgaagaatcgggcgcacagatcgccctgcgcgccaaacggttg
gcggtggatgcgcgcgagctgcagctgcaggccgagatccagctggaaaagatcctcgcc
accctggccgagcacaagcccgaagtggccgtgatcgattccatccagaccctctattcc
gatgcgctgacctcggctcccggttcggtggcccaggtgcgcgaatgcgccgcccaactt
acccgcgtggccaagacctcgggcatcaccatcatcatggtcggccacgtcaccaaggaa
ggcgcgctggccgggccgcgcgtgctggagcatatcgtcgatacggtgctctacttcgag
ggcgatacccattccagcttccgcctggtgcgggccttcaagaaccgctttggcgcggtc
aatgagctgggcgtgtttgccatgaccgagaagggcttgaagggcgtttccaatccctcg
gccctgttcctctcgcaacacgaaaaccaggtccctggttcctgcgtgatggtgacccag
gaggggacccgtccgctgctggtggaaatccaggcgctggtggacagttcgcacgtaccc
aacgcccgccgcctctcggtggggctggagcagaaccgcctggccatgctgctggcggtg
ctgcaccggcatgcgggagtggccgccttcgatcaggacgtcttcatcaatgcggtgggc
ggcgtcaagatcaccgaaccggcggctgacctggcggtactgctggccatcaattcttcc
atgcgcaacaagcccttgccgcgcggcttggtggtgttcggcgaagtcggcctggccggt
gagattcgccccgccccccgggggcaagagcgtttgcgcgaagcagccaagctgggtttc
tcgattgccgtgattcccaaggccaatgcgcccaagcaggccatcgaaggcttgaaggtg
atcgccgtggagcgtatcgacgacgccttgcagaaagcccgcgagatcgatgatcacgcc
agctga
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