Herbaspirillum seropedicae SmR1: Hsero_2160
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Entry
Hsero_2160 CDS
T01268
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase protein
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00300
Lysine biosynthesis
hse01100
Metabolic pathways
hse01120
Microbial metabolism in diverse environments
hse01230
Biosynthesis of amino acids
Module
hse_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Hsero_2160 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hse01002
]
Hsero_2160 (dapE)
Enzymes [BR:
hse01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Hsero_2160 (dapE)
Peptidases and inhibitors [BR:
hse01002
]
Metallo peptidases
Family M20
Hsero_2160 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ADJ63659
UniProt:
D8ITA0
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All DBs
Position
complement(2425445..2426578)
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AA seq
377 aa
AA seq
DB search
MIMSKTLALTQELMSLSSVTPEDKGCQARLAELLTPLGFVCETIQSGEVTNLWARKGTAQ
PLVVFAGHTDVVPTGPLEKWQSHPFQPTLREGRLYGRGASDMKTSIAAMVVACEEFTAAH
PDHKGSIGFLITSDEEGPAIDGTVVVCNALKARGEQLDYCIVGEPTSAKTLGDMIKNGRR
GTMSGKLTVKGIQGHIAYPQLARNPIHQAAPALAELVAEQWDAGNEYYLPTSWQISNIHG
GTGASNVIPGEVMIDFNFRFSTASTVEGLQQRVHAILDKHGLEYDLKWTVGGLPFLTPRG
DLSDALSKAIKDETGLDTELSTTGGTSDGRFIAQICPQVIEFGPPNDSIHKIDEHIEVRY
IDPLKNIYRKTLENLLA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgagcaagacgctggccctgacccaggaattgatgtccctttcttccgtcacc
cccgaagacaaaggctgccaggccaggctggcggaattgctcacgccgctgggcttcgtc
tgcgagaccatccagtccggcgaggtgaccaacctgtgggcgcgcaagggtacggcgcag
ccgttggtggtctttgccggccacaccgacgtggtgccgaccggtccgctggagaaatgg
cagtcgcatcccttccagccgaccctgcgcgagggccgcctgtacggtcggggcgcctcc
gacatgaagacctcgattgccgccatggtggtggcttgcgaagagttcacggcggcccat
cccgatcacaagggttccatcggcttcctcatcaccagcgatgaagagggcccggccatc
gacggcaccgtggtggtctgcaatgccctcaaggcacgcggcgaacaactggattactgc
atcgtcggtgaaccgacctcggccaagaccctgggcgacatgatcaagaacggccgccgc
ggcaccatgtcgggcaagctgaccgtcaagggcatccagggccatatcgcctatccgcaa
ctggcgcgcaaccccatccaccaggcggcgccggcactggctgaactggtggccgaacag
tgggatgcgggcaatgaatactacctgccgacgtcctggcagatctccaacatccatggc
ggcacgggtgcatccaacgtgatcccgggtgaggtgatgatcgacttcaacttccgtttc
tccaccgccagtaccgtggagggcctgcagcagcgcgtgcatgccatcctcgacaagcat
ggcctggaatatgacctgaagtggaccgtcggcggcctgcccttcctgaccccgcgcggc
gatctgtcggatgccctgtccaaggcgatcaaggacgagaccgggctggacaccgagctg
tccaccaccggcggcacttccgatggacgcttcatcgcccagatctgcccgcaggtgatc
gagttcggcccacccaatgacagcatccacaagatcgatgagcacatcgaagtgcgctac
atcgatcccttgaagaacatctaccgcaagacgctggaaaacctgctggcctga
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