Herbaspirillum seropedicae SmR1: Hsero_2165
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Entry
Hsero_2165 CDS
T01268
Symbol
smc
Name
(GenBank) chromosome segregation SMC ATPase protein
KO
K03529
chromosome segregation protein
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hse03036
]
Hsero_2165 (smc)
Chromosome and associated proteins [BR:
hse03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
Hsero_2165 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
SMC_hinge
AAA_23
AAA_15
AAA_29
ABC_tran
DUF1664
Motif
Other DBs
NCBI-ProteinID:
ADJ63664
UniProt:
D8IU02
LinkDB
All DBs
Position
2431540..2435070
Genome browser
AA seq
1176 aa
AA seq
DB search
MRLTSIKLSGFKSFVEPTHFQVPGQLVGVVGPNGCGKSNIIDAVRWVLGESKASELRGES
MQDVIFNGSTHRKPAGRASVELVFDNSAGKAAGQWGQYAEIAVKRTLTRDGTSSYYINNQ
SVRRRDIQDIFLGTGLGPRAYAIIGQGMISRIIEARPEELRIFLEEAAGVSKYKERRRET
ENRLHDTTENLTRLEDILRELNTNLEKLEAQAAVAKKFHELQNDQEEKQKLLWLLRKNEA
KAEQERFFKEIERAQIDLEEQTAKLRHVETELEHMRQAHYAAGDRLHQAQGHLYQTNSEI
GSLEAQIKFVIESRNRLQAQLNSLGAQRDQWQRQGTQQQEELAEAEIQLEEFGMRVEQAQ
HAVQDTSDRLPSLEAAWRESQVKTTESRGKIMQVQQQIELQSTHQRNASNILSGLAARRE
RLMQEKNGMAMPDEVHLSNLRMQLEEKQASLEEASMYLEEAQEQLPRLEEERRTAQELVS
KETSANAQLEARLTALKQLQESVQAQGKVQPWLEKHGLAELPRLWQKLHIESGWETALEA
VLRERMSALEMSNLDWAKAFFSDAPPAKLALYAPNAGLAQPEAQPVAGLKPFVTLLQLND
PGLRALMNDWLNHIYIADDTATAFAERAKLPLGGLFVTRQGHVVSNSSVRFYASDSEQDG
MLARQQEIENITKQQRAQAMLAEEAKGRAVRAEAALLAASQRLQELRQRVNSLTQSAHSL
QIEVMKLAEVQERFNQRSTQIATDLEEISMQEAEQQQVQAESEARFEELDIELAELQEQH
ENGQTDYLNKEQQLNDARTRLRELERAAQETEFAEKSHRNKIEELKRGIATALEQAAQLF
ASMQQGSLELESLDDQAAQAGLQELLDRRSEQERALADARHELDQLSQQLRSHEESRMQA
ERSLQPQRDRITELQLKEQAARLNQEQFSEALAQTQADEAALSEKLTSDMRPSYLQGEVT
RLTNAIAALGAVNLAALDELATASERKHFLDAQHADLNEAITTLQDAIHKIDMETRDLLQ
DTFDKVNRHFSELFPVLFGGGQAKLIMTGDEILDSGVQVMAQPPGKKNATIHLLSGGEKA
LTATALVFSMFQLNPAPFCLLDEVDAPLDDANTERFANMVKRMSDHTQFLFISHNKIAME
MAQQLIGVTMQEQGVSRIVAVDMESAANFSSAEQAA
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctaacttccatcaaattatctggattcaagtccttcgtcgagcctacgcatttc
caggttccggggcagctggtaggcgtggtcggaccgaacggctgcggcaaatccaacatc
atcgacgccgtgcgctgggtcctgggcgaatccaaggcttccgagctgcgcggcgagtcg
atgcaggacgtcatcttcaacggctccacccaccgcaagccggccgggcgcgcctcggtc
gagctggtgttcgacaactctgccggcaaggccgccggccagtggggccagtacgctgaa
atcgccgtcaagcgcacgctgacccgcgacggtacgtcctcctactacatcaacaaccag
tcggtgcgccgacgcgacatccaggacatcttcctcggtaccggcctgggcccgcgcgcc
tacgccatcatcggccagggcatgatctcgcgcatcatcgaggcgcgtcctgaagagctg
cgcatcttcctggaagaagccgctggtgtgtcgaagtacaaggaacgccgtcgcgagacc
gagaatcgcctgcacgacaccaccgaaaacctgacgcgcctggaagacatcttgcgcgaa
ctgaacaccaacctggaaaagctggaagcgcaagccgccgtggccaagaaattccacgag
ctgcagaacgatcaagaagaaaagcagaagctgctctggctgttgcgcaagaacgaagcc
aaggcggagcaggaacgcttcttcaaggaaatcgaacgcgcccagatcgacctggaagag
cagaccgccaagctgcgccacgtcgagaccgagctggagcacatgcgccaggcgcactac
gccgcaggcgaccgcctgcaccaggcgcagggtcacctgtaccagaccaattccgagatc
ggcagcctggaagcgcagatcaagttcgtcatcgaatcgcgcaatcgcctgcaagcccag
ttgaactccctgggcgcgcagcgcgaccagtggcagcgccagggcacccagcagcaggaa
gaactggccgaggccgagatccagctggaagaattcggcatgcgcgtggagcaggcccag
cacgccgtgcaggacaccagcgaccgcctgccttcgctggaagcagcctggcgcgagtcg
caggtcaagaccaccgaatcacgcggcaagatcatgcaggtgcagcagcagatcgaactg
caatcgacgcaccagcgcaatgcctccaacatcctctccggcctggccgcacggcgcgaa
cgcctgatgcaggaaaagaacggcatggccatgcccgacgaggtccacctgtccaacctg
cgcatgcagctggaagaaaagcaggcctcgctggaagaggccagcatgtacctggaagag
gcgcaggagcagttgccgcgcctggaagaagagcgccgcactgcccaggaactggtcagc
aaggaaacctcggccaacgcccagctggaagcgcgcctgacggccctgaagcaattgcag
gaaagcgtgcaggcccagggcaaggtgcaaccctggctggaaaagcacggcctggccgag
ctgccgcgcctatggcagaagctgcacatcgaatccggctgggaaaccgcgctggaagcg
gtgctgcgcgagcgcatgtcggccctggaaatgtccaacctggactgggccaaggccttc
ttcagcgatgcgccgccggccaagctggcgctgtacgcacccaatgccgggctggcccag
ccggaagcccagccggtggcgggcctgaagcccttcgtgacgctgctgcaactgaacgat
ccgggcctgcgcgccctgatgaacgactggctcaaccacatctacatcgccgacgacacc
gccaccgcctttgccgagcgcgccaagctgccgctgggtggcctgttcgtgacccgccag
ggtcatgtggtgagcaattccagcgtgcgtttctatgcctccgattcggagcaggacggc
atgttggcgcgccagcaggaaatcgagaacatcaccaagcagcaacgtgcgcaagcgatg
ctggccgaagaagccaagggccgcgccgtgcgcgccgaggcggccctgttggcggcctcg
cagcgcctgcaggaactgcgccagcgcgtcaactcgctgacccagtcggcgcacagcttg
cagatcgaggtgatgaagctggccgaggtgcaggaacgcttcaaccagcgcagcacccag
atcgctaccgacctggaagaaatctccatgcaggaagccgagcagcagcaggtgcaggcc
gaatccgaggcccgcttcgaagagttggacatcgaactggccgagctgcaggagcagcac
gagaacggccagaccgattacctcaacaaggaacagcagctcaacgacgcccgcacccgc
ctgcgcgagctggaacgcgccgcccaggaaaccgagttcgccgaaaagtcgcatcgcaac
aagatcgaggaattgaagcgcggtatcgctaccgcgctggaacaggccgcgcaactgttc
gccagcatgcagcagggctcgctggaactggaaagcctggacgaccaggctgcccaggcc
ggcctgcaggaattgctggaccgccgcagcgagcaggaacgcgcgctggccgacgcccgc
cacgaactggaccagctgtcgcagcaattgcgctcccatgaagaatcgcgcatgcaggca
gaacgcagcctgcagccccagcgtgaccgcatcaccgaactgcagctgaaggaacaggcc
gcacgcctgaaccaggagcagttctccgaagcgctggcgcagacccaggccgacgaggcc
gcgctgtccgaaaagctgaccagcgacatgcgcccgtcctacctgcaaggcgaagtgacc
cgcctgaccaacgccattgcggcgctgggggcggtcaacctggctgcgctggacgaactg
gccaccgcctccgagcgcaagcacttcctcgatgcccagcacgccgacctgaacgaagcc
atcaccacgctgcaggatgcgatccacaagatcgacatggaaacccgcgacctgctgcag
gacaccttcgacaaggtcaatcgccacttctcggaactgttcccggtgctcttcggcggc
ggccaggccaagctcatcatgaccggcgacgagatcctggactccggcgtgcaggtgatg
gcgcagccgccgggcaagaagaacgccaccatccacctgctttccggtggcgaaaaggcg
ctgaccgccaccgcgctggtgttctccatgttccagctcaatcccgcgccgttctgcttg
ctcgacgaggtggacgcgccgctggacgatgccaacaccgaacgcttcgccaacatggtc
aagcgcatgtcggaccatacccagttcctcttcatctcgcacaacaagatcgccatggaa
atggcgcagcaactgatcggggtgaccatgcaggagcagggcgtgtcgcgtatcgttgcc
gtggacatggaatcggcggccaacttctccagcgcggagcaggcagcctga
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