KEGG   Herbaspirillum seropedicae SmR1: Hsero_2169
Entry
Hsero_2169        CDS       T01268                                 
Symbol
def
Name
(GenBank) N-formylmethionyl-tRNA deformylase/polypeptide deformylase protein
  KO
K01462  peptide deformylase [EC:3.5.1.88]
Organism
hse  Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:hse00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    Hsero_2169 (def)
Enzymes [BR:hse01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.88  peptide deformylase
     Hsero_2169 (def)
SSDB
Motif
Pfam: Pep_deformylase
Other DBs
NCBI-ProteinID: ADJ63668
UniProt: D8IU06
LinkDB
Position
2439925..2440461
AA seq 178 aa
MAIREILKMGDPRLLRQAQPVTEFGTPELARLVDDMFQTMRAVNGAGLAAPQIGVDLQLV
IFGFGQNQRYPDAPPVPETVLINPVLTPLSEQEEEGWEGCLSVPGMRGVVPRWSRLRYQG
VDQNGEPIDRSVEGFHARVVQHECDHLQGILYPMRIRDFRRFGFTEVLFPELDPSQDD
NT seq 537 nt   +upstreamnt  +downstreamnt
atggcaatacgcgagattctgaagatgggtgatccgcgcctgctgcgccaggcgcagccg
gtgacggagttcggcacgccggaactggcgcgcctggtcgatgacatgttccagaccatg
cgtgcggtcaatggcgctggcctggccgcgccgcagatcggcgtggacctgcagctggtg
atcttcggcttcggccagaaccagcgctacccggacgcgccgcccgtgccggaaaccgtg
ctgatcaacccggtccttacacccttgtcggagcaggaagaagagggctgggaaggttgc
ctgtcggtacccggcatgcgcggtgtggtgccgcgctggagccgcctgcgctaccagggc
gttgaccagaacggcgagcccatcgatcgtagcgtggagggcttccatgcccgtgtggtc
cagcatgagtgcgaccatctgcagggcatcctgtatccgatgcgcatccgtgacttccgc
cggttcggctttaccgaggtgttgttcccggagcttgaccccagtcaggacgactga

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