Herbaspirillum seropedicae SmR1: Hsero_2327
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Entry
Hsero_2327 CDS
T01268
Name
(GenBank) 1,4-alpha-glucan branching enzyme protein
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00500
Starch and sucrose metabolism
hse01100
Metabolic pathways
hse01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Hsero_2327
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hse04147
]
Hsero_2327
Enzymes [BR:
hse01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
Hsero_2327
Exosome [BR:
hse04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Hsero_2327
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
CBM_48
Alpha-amylase
GlgB_N
Malt_amylase_C
Motif
Other DBs
NCBI-ProteinID:
ADJ63826
UniProt:
D8IV87
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All DBs
Position
2633944..2636403
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AA seq
819 aa
AA seq
DB search
MAHSDPTRLIDKGAAMPASRRKSLTEAPGAPPSEVVLDESLVARLMQGRLGDPFALLGPR
EIADAPEATQKAKAKRLRLCCYFPGASAVQVYARTSAAPDELHAPDSTGSLLGSLHEWSP
ATGQGESDHDQEAPRQRSGVFFGEVKLPRRAVQPPIPYVFHVTWRGADGRETLQITEDAY
AFGLLLSDFDLHLFREGRHRQLARCLGSQVMQIDGVEGVRFAVWAPNAQRVSVIGDFNQW
DGRRNPMRLRQSAGVWELFVPRLGDGALYKYEIIGPHGELLPGKADPMARATEVPPATAS
RVIDDSKLVSGRRWQDAHWLQQRAQGQTRQAPMSIYEVHAASWLRLPGEGNRNLDWNELA
DRLIPYVKGMGFTHVELLPVMEHPFGGSWGYQPLSQFAPSARFGPPAEFATFVDACHRAG
IGVLLDWVPAHFPSDPHGLAYFDGTPLYEHGDPREGIHQDWNTHIYNLGRHEVRGFLIAS
ALEWLEHFHVDGLRVDAVASMLYRDYSRSSGQWVPNIHGGRENLEAVDFLRELNQTVAER
CPGALMIAEESTAWPGVTAPVSEGGLGFTYKWNMGWMHDTLRYVELDSIYRRYHHHDITF
GMIYAFSESFVLPISHDEVVHGKGTLLQKMAGDAWQRFANLRAYLGFMWTHPGKKLLFMG
CEFAETREFDPDRSPHWDLLDDAHHRGVQRLVRDLNRLYAGTPALYRHDTEAKGFSWVVG
NDELNSVFAYLRQTDDEAPVLVVINMTPVPRHHYRIGVPPGQTQQDRWEEILNTDADCYG
GSHLGNGGQLRAQAQACHGHASSLVLTLPPLSTLVLRRG
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatagcgacccgacacgactgatcgacaaaggagcagcaatgccagcgtcacga
cgaaaaagcctcactgaagccccaggcgcgccgccatcggaggtggtgctggatgagtcc
ctggtcgcgcgcctgatgcagggacgactgggagacccctttgccttgctgggaccgcgc
gagatcgccgacgcgccggaggcgacgcagaaggccaaggccaagcggctgcggctttgc
tgctatttccccggcgccagcgcggtgcaggtctatgcccgtacgtccgccgcacctgac
gagcttcacgcgccggactcgacgggttcgctgttgggcagcctgcatgagtggtcgccc
gccactggccagggcgagtcggatcatgaccaggaagcgccgcgccagcgcagcggcgtc
ttctttggcgaggtcaagctgcccagacgtgcagtgcagcccccgattccctatgtcttc
cacgtcacctggcgcggcgctgacggcagggaaacgctgcagatcaccgaagacgcctac
gctttcggcctcttgctgagcgatttcgatctgcatctcttccgcgaaggccggcaccgg
cagctggcgcgctgcttaggatcgcaagtcatgcagatcgacggcgtagaaggggtgcgc
tttgcggtctgggcgcccaatgcgcagcgcgtctccgtgatcggcgacttcaatcaatgg
gatggccgacgcaatcccatgcgcctgcgtcagagcgccggtgtgtgggaactgttcgtc
ccgcgcctgggcgatggtgcgctctacaagtatgaaatcatcggcccccacggcgagctg
ttgcccggcaaagccgacccgatggcgcgggcgacggaagtcccgccggccacggcctcc
cgcgtcatcgacgacagcaagctggtcagcggccgccgctggcaggatgcgcactggctg
cagcaacgtgcgcaagggcagacccggcaagcgccgatgtcgatctatgaagtccatgcc
gcctcgtggctgcggctgccgggggagggcaaccgcaacctcgactggaatgaactggcg
gaccgcctgatcccctacgtcaaaggcatgggcttcacgcatgtggaattgctgccggtg
atggagcatccctttggcggctcatggggttaccagcccttgtcgcagttcgcgcccagc
gcgcgcttcggtccgccggccgagtttgccacgttcgtggatgcctgccatcgcgccggg
ataggcgtgctgctcgactgggtgccggcgcacttcccatccgatccgcatgggctggcc
tattttgatggcacgcccttgtacgagcatggcgatccccgcgaaggcatccatcaggac
tggaacacccacatctacaacctcggacgccacgaagtacgcggatttctgatcgccagc
gcgctggaatggctggagcatttccatgtcgatgggctgcgcgtggacgcggtcgcgtcc
atgctctatcgcgactacagccgcagcagcggccaatgggtgcccaacatccatggcggc
cgggaaaacctggaggccgtggatttcctgcgcgagctcaaccagaccgtcgccgagcgc
tgccccggggcgctgatgatcgccgaggaatccaccgcctggcccggcgtgacagcgccg
gtgtctgagggcggcctgggattcacctacaagtggaacatgggctggatgcacgacacg
ctacgttatgtggagctcgacagcatctaccgccgctaccatcatcacgacatcaccttc
ggcatgatctatgcgttttcggaatccttcgtgctgccgatttcccacgatgaagtggtg
catgggaagggcacgctgctgcaaaagatggccggtgacgcctggcagcgtttcgccaat
ctgcgcgcctatctcggcttcatgtggacgcatcccggcaagaagctgctcttcatgggc
tgcgagtttgccgaaaccagggaattcgaccccgaccggtcaccgcactgggacctgctc
gacgacgcccaccaccgtggcgtccagcggctggtgcgagacctgaaccggctgtacgca
ggcacgccggccctgtatcggcatgacacggaagccaagggcttttcctgggtggtcggc
aatgacgagctcaatagcgtcttcgcctatctccgccagacggacgatgaagcgccggtc
ctggtggtgatcaacatgaccccggtgccgcgccaccactaccggataggcgtgccccct
ggccagacccagcaggatcgatgggaggaaatcctcaataccgatgcagattgctatggc
ggcagccacctgggcaatggcggccagttgagggcgcaggcgcaagcctgtcatggccac
gccagttcgctggtgctgaccttgccgcccttgtcgacgctggtgctgcgccggggctga
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