Herbaspirillum seropedicae SmR1: Hsero_2456
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Entry
Hsero_2456 CDS
T01268
Symbol
livH
Name
(GenBank) ABC-type branched-chain amino acid transport system, permease component protein
KO
K01997
branched-chain amino acid transport system permease protein
K01998
branched-chain amino acid transport system permease protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
hse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_2456 (livH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hsero_2456 (livH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_2456 (livH)
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Hsero_2456 (livH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ADJ63955
UniProt:
D8IWD5
LinkDB
All DBs
Position
complement(2787471..2789357)
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AA seq
628 aa
AA seq
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MTLASLAVQLLNGLADASAMFMVAAGLSLIFGVTRIVNFAHGSFYMLGLYLAYSLVDRLG
ATPWGYWAALLLAALPVAALGALVELTILRRIYRAPELFQLLATFALVLVIKDAALWYWG
PEDLFGPRAPGLAGAVQVLGRRLPQYDLLLMAIGPLVFALLWLLLNRTRWGALIRAATQD
REMLGALGVNQAWLFTGVFALGCFLAGLGGALQGPRLPANLALDLDTIGTAFVVVVVGGM
GSIGGAFAAAVLIAEVKALCIALGTVSCFGIELSLSRLTLVAEFLVMAVILVVRPWGLLG
KPLALVRAASHHEAPLRAASQRERWAAMVLLAALLALPLLAGRFPYLPVLMVEILVAVLF
AASLHFLMGPGGMVSFGHAAYFGLGAYAAALVTLRLQWPMPLAMLAGAGTAMLAALLFGW
FCVRLSGVYLAMLTLAFAQIVWAAIYQWDDLTGGSNGLVGLRTAAALASPLAYYYLALLC
SALGVYLLRRVIHAPFGLALRAARDASGRAQALGMDVRALQWGGFALAGLFCGLAGVLFA
FSKGSISPEVAGVNRSVDGLVMVLLGGVQSLAGPLLGASVFTWLQDLVARETDYWRALLG
GVILLLVLLLPGGLAGAWRRAGRPGEGA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttgccagcctcgccgtccagctgctcaatggcctggccgacgcctctgccatg
ttcatggtcgcggccggcctgtcgctgatcttcggcgtcacgcgcatcgtcaacttcgcc
catggttccttctacatgctgggcctgtacctggcctacagcctggtggaccggctgggc
gcaacgccctggggttactgggcggcgctgctgctggcggccttgccggtggccgcgctg
ggggcgctggtcgagctcaccatcttgcgccgcatctatcgcgcacccgaactgttccag
ttgctggccacctttgcgctggtgctggtgatcaaggatgcggcgctctggtattggggg
ccggaagatctgttcgggccgcgcgcacccggcctcgctggggcggtgcaagtgctgggg
cggcgtctgccgcagtatgacctgctgctcatggccatcggtccgctggtgttcgcgctg
ctgtggctgctgctcaaccgtacccgctggggcgcactcatccgcgccgccacccaggac
cgcgaaatgctgggcgcactgggcgtgaaccaggcctggctgtttaccggcgtgtttgcg
ctgggctgctttctggcaggcctgggcggtgcgctgcagggaccgcgcctgccggccaac
ctggcgctcgatctcgataccatcggcacggccttcgtggtggtggtggtcggcggcatg
ggctccatcggtggcgctttcgcagcggccgtgctgatcgccgaggtcaaggcgctgtgc
atcgccttgggcacggtctcgtgcttcggtatcgaactctcgctgtcgcggctgacgctg
gtggccgaattcctggtgatggcagtgatcctggtcgtgcggccctgggggctgctgggc
aagccgctggcgctggtgcgcgccgccagtcatcacgaagcgccgctgcgcgcggccagc
cagcgtgagcgctgggccgccatggtgctgctggcagcgctgctggccttgcccctcttg
gccgggcgcttcccttatctgccggtcctgatggtggaaatcctggtggccgtgctgttt
gccgccagcctgcatttcctgatggggccgggcggcatggtgtccttcggtcacgctgcc
tacttcggcctgggcgcctacgccgccgccctggtcacgctgcgcctgcaatggccgatg
ccgctggccatgctggccggggccggtacggccatgctggcggcgctgctgttcggctgg
ttctgcgtgcgcctgtccggcgtctacctggccatgctgacgctggcctttgcgcagatc
gtctgggccgccatctatcaatgggatgacctcaccggcggcagcaatgggctggtcgga
ttgcgcacggccgccgcgctggcctcgccgctggcctactactacctggcgctgctgtgc
agcgcgctgggcgtctacctgctgcggcgggtgatccatgcgccgttcggactggccttg
cgcgccgcacgcgatgcctcggggcgcgcgcaggcgctgggcatggatgtgcgcgccttg
caatggggcggctttgcattggcgggcctcttctgcggactggccggggtgttgttcgct
ttttccaagggcagcatctcgcccgaagtcgccggcgtgaaccgttccgtggatggcctg
gtgatggtgctgctgggtggcgtgcaaagcctggcggggccgctgctgggcgcctccgtg
ttcacctggctgcaagatctggtggcgcgcgagactgactattggcgcgccttgctgggc
ggtgtgatcctgttgctggtgctgctcctgccgggcggcctggctggcgcctggcgcagg
gccgggcggccaggggagggcgcatga
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