Herbaspirillum seropedicae SmR1: Hsero_2515
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Entry
Hsero_2515 CDS
T01268
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase (NADP) protein
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00020
Citrate cycle (TCA cycle)
hse00480
Glutathione metabolism
hse00720
Other carbon fixation pathways
hse01100
Metabolic pathways
hse01110
Biosynthesis of secondary metabolites
hse01120
Microbial metabolism in diverse environments
hse01200
Carbon metabolism
hse01210
2-Oxocarboxylic acid metabolism
hse01230
Biosynthesis of amino acids
hse04146
Peroxisome
Module
hse_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hse_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Hsero_2515 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
Hsero_2515 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Hsero_2515 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Hsero_2515 (icd)
Enzymes [BR:
hse01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Hsero_2515 (icd)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
ADJ64014
UniProt:
D8IWJ4
LinkDB
All DBs
Position
2865719..2867947
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AA seq
742 aa
AA seq
DB search
MTTGNPTIIYTLTDEAPYLATHSLLPIVKKFTAAAGIDVVESDISVAARILAEFPEYLTD
EQKVPDNLAALGALTQSPDANIIKLPNISASILQLQAAIRELQSRGYKLPDYPENPTTEE
EKALQKRYAKVTGSAVNPVLREGNSDRRAPNAVKNYARKHPHSMAKWSMASRTHVAHMHG
GDFYAGEKSLTLDKAVDVKMDLVTKSGETIVLKPKISLQAGEIIDSMFMSKKALCAYYEE
QMQDAFETDLLLSVHVKATMMKVSHPIVFGHAVRTYYKDTFTKHAKLFAEIGVNPNNGMS
GVYEKINTLPDAKKAEVLADLKADEAKRPRLAMVDSAKGITNLHAPNDVIVDASMPAMIR
AGGKMWNAAGKTEDTKALLPESTFARIYQEMINFCKTNGAFDPTTMGTVPNVGLMAQKAE
EYGSHDKTFEIAQAGVARIVTLDGQVLLEQNVEEGDIWRMCQVKDAAVRDWVKLAVTRAR
LSGMPAVFWLDPYRPHEAELIKKVNTYLKDHDLTGADIQIMSQVRAMRYTLERVIRGLDT
ISVTGNILRDYLTDLFPIMELGTSAKMLSIVPLMAGGGMFETGAGGSAPKHVQQLVGENH
LRWDSLGEFLALAVSIEEVGIKTGNSKAKILAKTLDAATGKLLDNNKSPSPKTGELDNRG
SHFYLALYWAQELAAQKDDAELAKQFAPLAKALAENEQKIVEELNSVQGKQVDIGGYYLP
DREKTFAVMRPSATLNQALETL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
gtgactactggcaacccgaccatcatctatacgctgaccgacgaggcaccctatctggcg
acccattcgctcttgcccatcgtcaagaagttcaccgccgccgctggcatcgacgtcgtc
gaaagcgatatctcggtggctgcgcgtatcctggctgaattcccggagtacctcaccgat
gagcagaaagtccccgacaacctggccgcactgggcgcactgacccagagccccgacgcc
aacatcatcaagctgcccaacatcagcgcctcgatcctgcagctgcaagcggccatccgc
gaactgcagtcgcgcggctacaagctgcccgactatccggaaaaccccaccaccgaagaa
gaaaaggccctgcagaagcgctacgccaaggtcaccggcagcgccgtgaacccggtcctg
cgtgaaggcaactccgaccgtcgcgcgcccaacgccgtcaagaactacgcccgcaagcac
ccgcactcgatggccaagtggtccatggcctcgcgcacccacgtggcccacatgcacggc
ggcgacttctacgccggcgaaaagagcctgaccctggacaaggccgtggacgtcaagatg
gacctggtcaccaagtccggtgaaaccatcgtcttgaagccgaagatctcgctgcaggcc
ggtgaaatcatcgacagcatgttcatgagcaagaaggccctgtgcgcctactacgaagag
cagatgcaagacgccttcgagaccgacctgctgctgtcggtgcacgtcaaggccaccatg
atgaaggtctcgcaccccatcgtcttcggccacgccgtgcgcacctactacaaggacacc
ttcaccaagcacgccaagctgttcgccgagatcggcgtgaaccccaacaacggcatgtcc
ggcgtctacgaaaagatcaacaccctgcccgacgccaagaaggccgaagtgctggccgac
ctgaaggccgatgaagccaagcgcccgcgcctggccatggtggactccgccaagggcatc
accaacctgcacgcccccaacgacgtgatcgtcgacgcctccatgccggccatgatccgc
gcaggcggcaagatgtggaacgccgccggcaagaccgaagacaccaaggccctgctgccg
gaatcgaccttcgcccgcatctaccaggagatgatcaacttctgcaagaccaacggcgcc
ttcgacccgaccaccatgggcaccgtgcccaacgtcggcctgatggcccagaaggccgag
gaatacggttcgcacgacaagaccttcgaaatcgcccaagccggtgtggcgcgcatcgtc
accctggacggccaagtgctgctggagcagaacgtggaagaaggcgacatctggcgcatg
tgccaggtcaaggacgccgccgtgcgtgactgggtcaagctggccgtgacccgcgcccgc
ctgtccggcatgccggccgtgttctggctggacccgtaccgtccgcacgaagccgaactg
atcaagaaggtcaacacctacctgaaggatcacgacctgaccggcgccgacatccagatc
atgtcgcaagtgcgcgccatgcgttacaccctggaacgcgtcatccgaggcctggacacc
atctcggtgaccggcaacatcctgcgcgactacctgaccgacctgttccccatcatggaa
ctgggcacctcggccaagatgctgtcgatcgtcccgctgatggctggtggcggcatgttc
gaaaccggtgctggcggttcggcgcccaagcacgtgcaacagctggtcggtgaaaaccac
ctgcgctgggattcgctgggcgagttcctggccctggccgtgtccatcgaagaggtcggc
atcaagaccggcaacagcaaggccaagatcctggccaagaccctggacgccgccaccggc
aagctgctggacaacaacaagtcgccctcgcccaagaccggtgagctggacaaccgcggt
agccacttctacctggccctgtactgggcgcaggaactggccgcgcagaaggacgacgcc
gagctggccaagcagttcgccccgctggccaaggcactggccgagaacgagcagaagatc
gtcgaagagctgaactcggtgcagggcaagcaggttgatatcggcggttactacctgccg
gatcgcgagaagaccttcgccgtgatgcgtccgagcgccacgctgaaccaggcgctggaa
acgctgtaa
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