Herbaspirillum seropedicae SmR1: Hsero_2563
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Entry
Hsero_2563 CDS
T01268
Name
(GenBank) ABC-type amino acid transport system, periplasmic component protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02010
ABC transporters
hse02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hsero_2563
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hsero_2563
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_2563
Transporters [BR:
hse02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Hsero_2563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
ADJ64062
UniProt:
D8IWP2
LinkDB
All DBs
Position
complement(2921808..2923139)
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AA seq
443 aa
AA seq
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MKSIKHLRQLLLATACAASLLSAAAPALAQASDQFIAIPSYRVGPYGTNGQSYYGGYVDY
LNYINIKEGGVNGVKLSWEECETEYNNAKGVECYERMKNKNPVTHGTAINPMATGISYAL
IDKTAEDKVPLVMIGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKYLAGKNNGSLAGKK
IVFLYHDSAYGKEPIVALQAEASIGKFKLVEIPVAHPGNEQGAQWLRIRQENPDYVIFWG
WGVMNQTALKAAQKVGYARDKIVGSWWAGSEEDTIPAGDAAKGYLSATWNVAGKDVPVIA
DIDKVVYGAGKGNMQDKNKLGSILYNRGVSAAIATVEAVRTAQGKYGKGKVMSGEQVRWG
FENLNITDARLKALGATGLLPEIKTSCDNHEGSGKVKIQQWDGSKWVLVSDWIEGNKNLI
HPLFKASAAKYAKEKGITPACMK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcatcaagcatctgcggcagctgctattggccaccgcctgcgccgccagcctg
ctgtcggcggccgccccggcgctggcgcaggccagcgaccagttcatcgccatccccagc
taccgggtcggcccttatggcaccaacggccagtcgtattacggcggctatgtcgattac
ctcaactacatcaacatcaaggaaggcggcgtcaatggcgtcaagctgtcctgggaagaa
tgcgagaccgagtacaacaacgccaagggcgtggagtgctacgagcgcatgaagaacaag
aacccggtcacccacggcaccgccatcaaccccatggccaccggcatctcctatgccttg
atcgacaagaccgccgaagacaaggtgccgctggtgatgatcggctatggccgtaccgat
gcggtcgatggctcggtgttcccgtatgccttcccgctggtgacgacctaccagatgcag
gtttcggccatcgtcaagtacctggccggcaagaacaatggttcgctggcaggcaagaag
atcgtcttcctgtaccacgactcggcctatggcaaggaacccatcgtggcgctgcaggcg
gaagcttccatcggcaagttcaagctggtggaaatcccggtggcgcaccccggcaacgag
cagggcgcgcagtggctgcgcatccgccaggagaaccccgactacgtgatcttctggggc
tggggcgtgatgaaccagaccgcgctgaaggcggcgcagaaggtcggctatgcgcgtgac
aagatcgtcggttcctggtgggccggttcggaagaagacaccattcccgccggtgacgcc
gccaagggctatctgtcggcgacctggaacgtcgccggcaaggatgtgcccgtgatcgcg
gacatcgacaaggtagtctatggcgcgggcaagggcaacatgcaggacaagaacaagctc
ggctccatcctctacaaccgcggcgtctcggcggccatcgccaccgtggaagcggtgcgg
accgcccagggcaaatacggcaaaggcaaggtcatgagcggcgagcaggtgcgctggggc
tttgaaaacctcaacatcaccgatgcccgtctcaaggcgctgggtgcgaccggcctgctg
ccggagatcaagacctcctgcgacaaccatgaagggtccggcaaggtcaagatccagcaa
tgggatggcagcaagtgggtgctggtatcggactggatcgagggcaacaagaacctgatc
cacccgctcttcaaggcgtctgcggcgaaatacgcaaaagaaaaaggcatcactcctgcc
tgcatgaagtag
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