Herbaspirillum seropedicae SmR1: Hsero_2643
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Entry
Hsero_2643 CDS
T01268
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis (CobD/CbiB) protein
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00860
Porphyrin metabolism
hse01100
Metabolic pathways
hse01240
Biosynthesis of cofactors
Module
hse_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Hsero_2643 (cobD)
Enzymes [BR:
hse01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
Hsero_2643 (cobD)
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Motif
Pfam:
CobD_Cbib
AmpE
Motif
Other DBs
NCBI-ProteinID:
ADJ64139
UniProt:
D8IXN7
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All DBs
Position
complement(3018148..3019101)
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AA seq
317 aa
AA seq
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MLIGLSWPWLAVLMALGLALDLRLGEARRWHPLVGFGRLAQRIEAALNRAPGLRLRGVLA
WALAVLPPVLLAAWLIAQTPWWLAALLHAGLLYFCIGLRSLREHTLPIAQALGAGELAQA
RRLTAWIVSRDTRSASEQELAKAGVESLLENGNDAVFGTLFWFLLAGGPGALLFRLSNTL
DAMWGYRNARFLYFGWAAARIDDALNWCPARLTALSYAVLGQRRQALACWKEQAPAWSSP
NAGPVMAAGAGALGLALGGAAVYDGEVEQRPPLGCGVAPQGADIVRAWRLVAMSAALWMA
VVAAVALPWLLGGALHA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcggcctgtcgtggccctggctggccgtgctcatggcgctgggcctggccctg
gacctgcgcctgggcgaggcgcggcgctggcatccgctggtcggtttcgggcggctggcg
cagcgcatcgaggccgcgctcaaccgggctcccggattgcggctgcgcggtgtgctggcc
tgggcgctggcggtcttgccgccggtgctgctggcggcctggctgatcgcgcagacgccc
tggtggctggccgcactgctgcatgctggactgctgtatttctgcatcggcctgcgcagc
ctgcgcgaacacaccttgccgattgcccaggcgctgggggccggcgagctggcgcaggcg
cgccgcctgactgcctggatcgtcagccgcgacacccgcagcgccagcgagcaagagctg
gccaaggcgggcgtggaatcgctgctggaaaacggcaatgacgccgtcttcggtacgctg
ttctggttcctcctcgccggtggtccgggcgctttgctgtttcgcctgtccaataccctg
gatgcgatgtggggctaccgcaatgcgcgcttcctgtatttcggctgggccgcggcgcgc
atcgacgatgccttgaactggtgtcccgcgcgcctgacggccctgagctatgccgtgctc
ggccagcgccgccaggccctggcctgctggaaggaacaggcgccggcctggagcagtccc
aatgccggcccggtgatggctgccggcgcaggtgcgctgggcctggcgctgggtggcgct
gcggtctacgacggggaagtggagcagcgtccgccgctgggttgcggcgtcgctccgcaa
ggggcggacatcgtgcgcgcctggcggctggtggccatgagtgcggcgctatggatggcc
gtggtcgccgcagtggcgctgccgtggctgctgggaggggcgctgcatgcttga
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