Herbaspirillum seropedicae SmR1: Hsero_2786
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Entry
Hsero_2786 CDS
T01268
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase (Class II) protein
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Hsero_2786 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hse01007
]
Hsero_2786 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hse03016
]
Hsero_2786 (lysS)
Enzymes [BR:
hse01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Hsero_2786 (lysS)
Amino acid related enzymes [BR:
hse01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Hsero_2786 (lysS)
Transfer RNA biogenesis [BR:
hse03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Hsero_2786 (lysS)
Prokaryotic type
Other AARSs
Hsero_2786 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ADJ64281
UniProt:
D8IYU6
LinkDB
All DBs
Position
3184639..3186180
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AA seq
513 aa
AA seq
DB search
MTTQNTPAAQPAADENSIIAERRAKLAAIREQGVAFPNDFRPANQAADLHAKYDGFENEA
LEAEPVTVTVAGRMMLKRVMGKAAFATLQDASGVRADGRIQLYITRDVTGEEAMAAFKHY
DLGDILGAEGTLFKTKTGELSVKVTKLKLITKSLRPLPDKFHGLADQEMKYRQRYVDLIM
SEETRRTFKARTAAMSSIRRFMETHGFMEVETPMLHPIPGGAAAKPFITHHNALDMQMFM
RIAPELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYVDYQWLMGFTEQ
VIRQAAIDAHGTAVLSYQGRELDLSKPFDRLTITGAILKYAPNYTEAQLADIDFLRTELK
KFGVKTDQAPLAGAGIGALQLALFEETAESQLWNPTYIIDYPVEVSPLARASDTVAGITE
RFELFITGREIANGFSELNDAEDQAARFHAQVAAKDAGDEEAMYYDADYIRALEYGMPPA
GGCGIGIDRLMMLITDSPNIRDVILFPHLRRED
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcaaaacacccccgccgcccagccggcagccgacgagaacagcatcatcgcc
gagcgccgcgccaagctggcggccatccgcgaacagggcgtcgccttccccaacgacttc
cgtccggccaaccaagccgccgacctgcatgccaagtacgacggtttcgagaacgaagcc
ctggaagccgagccggtcaccgtcaccgtcgccggtcgcatgatgttgaagcgggtcatg
ggcaaggcggccttcgccaccctgcaggatgcctcgggcgtgcgcgccgatggccgcatc
cagctctacatcacccgcgacgtcaccggcgaagaagccatggccgccttcaagcactat
gacctgggcgacatcctgggcgccgaaggtacgctgttcaagaccaagaccggcgaactg
tcggtgaaggtcaccaagttgaagctcatcaccaagtcgctgcgcccgctgccggacaag
ttccacggcctggccgaccaggaaatgaagtaccgccagcgctacgtcgacctgatcatg
agcgaagagacccgccgcaccttcaaggcgcgtaccgctgcgatgtcgtcgatccgccgc
ttcatggaaacccatggcttcatggaagtggaaaccccgatgctgcacccgatcccgggc
ggcgcggcggccaagcccttcatcacccaccacaatgcgctggacatgcagatgttcatg
cgtatcgcccccgagctgtacctgaagcgcctggtggtgggcggctttgagcgcgtcttc
gagatcaaccgcaatttccgcaatgaaggtgtgtcgccgcgtcacaacccggaattcacg
atgatggagttctacgccgcctacgtggattaccagtggctgatgggcttcaccgaacag
gtgatccgccaggccgccatcgatgcgcacggcaccgccgtattgagctaccagggccgc
gagctggacctgtccaagcccttcgaccgcctgaccatcaccggcgcgatcctgaagtac
gcgcccaactacaccgaggcgcaactggccgacatcgacttcctgcgcactgaactgaag
aagttcggcgtcaagaccgaccaagccccgctggccggcgctggcatcggcgcgctgcaa
ctggcgctgttcgaagagaccgccgagtcgcagctgtggaatccgacctacatcatcgac
tacccggtcgaagtctcgccgctggcgcgcgcttccgacactgtggccggcatcaccgag
cgctttgaactcttcatcacgggtcgcgagatcgccaacggcttctccgagttgaatgac
gccgaagaccaggccgcccgcttccacgcccaggtggcggccaaggacgctggcgacgaa
gaagccatgtactacgacgccgactacatccgtgcgctggaatacggcatgccgccggct
ggtggctgcggcatcggtatcgaccgcctgatgatgctcatcaccgactcgcccaatatc
cgtgacgtgatcctgttcccgcacctgcgtcgcgaagattga
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