Herbaspirillum seropedicae SmR1: Hsero_2878
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Entry
Hsero_2878 CDS
T01268
Name
(GenBank) calcium binding secreted hemolysin protein
Organism
hse
Herbaspirillum seropedicae SmR1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
HCBP_related
RTX_C
Peptidase_C39_2
Motif
Other DBs
NCBI-ProteinID:
ADJ64370
UniProt:
D8IZN0
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Position
complement(3267797..3271039)
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AA seq
1080 aa
AA seq
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MRFTDVDDCASMAVGRAIQLAGKGPTALPEGGLARQRVPGDGPAAMGPVPFIWPMRCACG
RSLHRPRRGRCCHCANGTMVRFTLVLGSGSMDAGQEKTQDLHHEAQGRVRKRHVPGGRCR
PVGVPLSYSAVDGAFSRENSVSTSTDIKRDSAAASVAQSTVQPIIRRINDRFISIQTGSV
SEVRFSPIRPGLGLFDAGFPAPSVKPANPPAAQSAPPPSKADATPAVTTPKPTPAKADAA
PTVAITKPVPAVAVDVAKPDSTSSVSSNAPASPVSKPAAQPAAATPSKADAAPTVAITKP
VPPVTVDVAKPDSTSSVSTNVPASPASKPAAQPAASTPSKADAAPTVAITKPAPIVTVDV
AKPDSTSTAAKDKPDTTKPAAGKQDLSKPEPGKSINLSPDSLLPISAINERPSKPELEST
SSAAARRLHILDHNGKAMSAAQVAALDLNHNGKLEAGELADLKAWTDSNEDDLAQASELT
SLSDALKAAGLPNTLRATDYSIYTVGKGPRQEWNFKSLLATLSGQGAFFFVLPATPQAGT
AGDDQLLGSTGEDSLHGGDGKDWLFGFDGNDVLDGGLGADTLYGGDGDDTYIVNSSDDRV
VETINGGHDTVIASCSTILAANVEDLRLVEGGNLNGAGNTLDNLIVGNGQDNILDGGVGA
DTMIGGLGNDSYFVDDAGDQVTEAADEGVDTVYSRISMRLAANVENLTLLDGGTPLRGTV
EGKAALIYGAPKAYDLDYQQGNGVTGYDGTCGETSVVNVLRMADQWVSEKEVVQRAIDKK
WCITDAPSASAKGGSSALDQKRLLESYGLRAEYTLKYDQDKLAALVKEGRGVMVSVDSRR
LWSGGKGLNFTDHVVTVTGVAYAAEKGELIGFYIADSGRGLAEDATRYVSADELRAMADV
RGASMVYTLDPIKLRQQNLEATGNELDNHLVGNRGDNLITGAKGNDTLVGQAGNDTYVFG
KGDGRDLVADHDATAGNIDTIKFSDARQTNLWFRQVGQDLQIDVLGTTDQVTVKDWYVGG
DSGTDNRIERIKTADGKTLYDSDVDRLVQAMASFAPPPATQTSWRDGQQEKGAVLLTVNH
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
gtgcgatttaccgatgtggacgactgcgcttcaatggcagtgggacgcgcgatccagctt
gcggggaaggggccgacagccctgccggagggaggcctcgcaagacagcgtgttccaggg
gacgggcctgcagcaatggggcccgtccctttcatttggccgatgcggtgtgcttgcggg
cgcagcttgcatcggcctcgccgaggccggtgctgtcattgcgccaacggcaccatggtg
cgatttaccctggtccttgggtcaggttcaatggatgcgggacaagaaaaaactcaagac
ttgcaccacgaggctcaaggccgcgtacgcaagcgacacgtccccgggggaaggtgcaga
ccggttggcgttcccctgagctacagcgccgttgatggcgcattttccagggagaacagc
gtgtccaccagcactgacatcaagcgcgacagcgcagccgcatccgttgcccagagcacc
gtgcaacccatcatccggcgcatcaatgaccgtttcatcagcatccagaccggcagcgtc
tcggaagtccgcttttcgccgatccggccggggctcggcttgttcgatgcgggtttcccc
gcgcccagcgtcaagcctgccaaccctcccgccgcgcagagtgcgccgccgccgtccaag
gccgatgcgacaccggctgtcacgacccccaagccgactccagccaaggcagacgccgcg
ccaacggtcgcgatcaccaagccggttccagccgttgcggtcgatgtcgccaagcctgac
agtaccagctcggtcagctccaatgcgccggcaagcccggtgagcaaacctgccgcccag
cctgctgcggctaccccatccaaggcagatgccgcgccaacggtcgcgatcaccaagccg
gttccacccgttacggtcgatgtcgccaagcctgacagtaccagttcagtcagcaccaat
gtgccggcaagccccgctagcaaacctgccgcccagcctgctgcgtccaccccatccaag
gcagatgccgcgccaacggtcgcgatcaccaagccagccccaatcgtgacggtcgatgtc
gccaagcctgacagtaccagtacagcagccaaggacaaacctgacaccaccaagcctgcc
gccggcaagcaggacctcagcaagcccgagcccggcaagtcaatcaatctcagccccgac
agcctgttgccgatcagcgccatcaacgagcgtccctccaagcccgagcttgaatcgacg
agctcggcagcggcgcgcagattgcacatcctcgaccacaacggcaaggccatgagcgcc
gcgcaagtcgccgcgctggacctgaaccacaacggcaagctggaggccggcgaactggcc
gacctcaaggcctggaccgatagcaacgaagacgacctggcccaggccagtgaactgacc
agcctgtcggatgccctgaaggccgccgggctgcccaacaccctgcgcgccaccgactat
tccatctacactgtgggcaaggggccgcgccaggaatggaacttcaagtcgctgctggcg
acgttgtcggggcagggcgctttcttcttcgtgctccccgccacgccccaggccggaacg
gccggcgatgaccagttgctgggcagcaccggagaagactccttgcatggcggtgatggc
aaggactggctgttcggtttcgacggcaatgacgttctcgatggcggcctcggtgcggac
accctgtacggcggtgatggcgacgacacctacatcgtcaatagcagcgatgaccgcgtg
gtggaaaccatcaatggtggtcatgacaccgtcatcgccagctgcagcaccatcctggcc
gccaacgtcgaggacctgcgcctggtggaaggcggcaatctcaatggcgccggcaatacc
ctggacaacctgatcgtgggcaatggccaggacaatatcctcgatggcggcgtcggcgcc
gacaccatgatcggcggcctgggcaacgacagctatttcgtcgacgatgcgggcgaccag
gtgaccgaagctgcagacgagggcgtggataccgtctacagccggatcagcatgcggctg
gccgccaacgtcgaaaacctgaccctgctggatggcggcacgccgctgcgtggcacggtc
gagggcaaggcggccttgatctatggggctccaaaggcctatgacctggactatcagcaa
ggcaatggcgtgaccggctacgacggcacctgcggcgaaaccagcgtggtcaatgtcttg
cgcatggccgaccagtgggtgtcggagaaggaggtggtgcaaagggcgatcgacaagaaa
tggtgcatcaccgatgcaccgagcgcatcagccaagggcggcagctcggcgctggaccag
aaacgcctgctggaaagctatggcctacgggccgaatacaccctcaagtacgaccaggac
aaactggccgccttggtcaaggaagggcggggcgtgatggtctccgtggacagccgtcgg
ctctggtcgggcggcaagggactgaacttcaccgaccatgtggtcaccgtgaccggcgtg
gcctatgccgcagagaagggcgagctcatcggcttctacatcgctgattccggcaggggc
ttggccgaggatgcgacccgttacgtgagtgcggatgaactgcgggccatggccgacgtg
cgcggcgccagcatggtctacacgctggatccgatcaagctgcgccagcagaacctggaa
gccacgggcaacgaactggacaaccacctggtaggcaatcgcggcgacaacctcatcacc
ggcgccaagggtaacgacaccctggtggggcaggcaggcaacgacacctacgtcttcggc
aagggcgatggtcgcgacctggtggcagaccacgacgctacggcgggcaacatcgatacg
atcaagttcagcgacgcccggcagaccaatctgtggttccgccaggtcggccaggatctg
cagatcgacgtcctgggcacgacggaccaggtcacggtgaaggactggtacgtgggcggt
gacagtgggacggacaaccgcatcgaacgtatcaagactgccgatggcaagaccctgtac
gacagcgatgtcgacaggttggtgcaggccatggccagctttgcgccacccccggccacc
cagaccagctggcgcgatgggcagcaggaaaagggagccgtactgctgaccgtgaatcac
tga
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