Herbaspirillum seropedicae SmR1: Hsero_2955
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Entry
Hsero_2955 CDS
T01268
Name
(GenBank) Fe-S-cluster redox enzyme protein
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hse03009
]
Hsero_2955
Enzymes [BR:
hse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
Hsero_2955
Ribosome biogenesis [BR:
hse03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Hsero_2955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
ADJ64443
UniProt:
D8IZV3
LinkDB
All DBs
Position
complement(3362842..3364014)
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AA seq
390 aa
AA seq
DB search
MNTALTNLLDMDPAQLVAYCGELGEKPFRAKQLQRWIHQFGVADFDQMTDLAKSLRDKLK
TRAEVRAPAIISDHTSTDGTRKWLVDVGQGNAVETVFIPEENRGTLCVSTQAGCAVNCRF
CSTGKQGFNRNLSVAEIIGQLWMAEFELRKTKGIEGGPKGERQITNVVMMGMGEPLLNFE
PTVTALRLMLDDNAYGLSRRRVTLSTSGVVPMIGKLSQECPVALAVSLHASNDALRDSLI
PLNRKHPLRELMLACKRYLEFAPRDFITFEYCMLDGVNDTDTHARELVALVKEGETAIPC
KFNLIPFNPFPESGLKRSHNPRIKAFAQILMDAGIVTTIRKTRGDDIDAACGQLAGEVKD
RTRVQERMQKMAEYQNKFGKDFGRIVEISG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagctctcaccaatctgctggatatggatcccgcgcaactcgtcgcttactgt
ggcgagttgggtgagaagccgtttcgcgccaagcagttgcagcgttggatacaccagttc
ggcgtcgctgatttcgatcagatgaccgacctggccaagtcgctgcgcgacaagctgaag
acccgcgccgaagtccgcgcgccggccatcatcagcgaccatacctccaccgacggcaca
cgcaagtggctggtcgacgtgggccagggcaatgcggtggaaaccgtgttcatccctgaa
gaaaatcgcggcacgctgtgcgtttccacgcaggcgggctgtgccgtcaattgccgcttc
tgctcgaccggcaagcagggcttcaaccgcaatctctcggtggccgagatcatcggccag
ttgtggatggccgagtttgaattgcgcaagaccaagggcatcgaaggcggccccaagggc
gagcgccagatcaccaatgtggtgatgatgggcatgggcgagccgctgctcaacttcgag
cccaccgtcacggcgcttcgcctgatgctggacgacaatgcctacggcctgtcgcgccgc
cgcgtgacgctgtccaccagcggcgtggtgccgatgatcggcaagctgtcccaggaatgc
ccggtggcgctggccgtctcgctgcacgcgtccaacgatgcgttgcgcgattcgctcatt
ccgctcaatcgcaagcacccgctgcgcgagctgatgctggcctgcaagcgctacctcgaa
ttcgcgccgcgcgacttcatcaccttcgagtattgcatgctcgatggcgtcaacgacacc
gacacccatgcccgcgaactggtcgcgctggtgaaggaaggcgagacggccatcccctgc
aagttcaacctgattcccttcaatcccttccctgagtcgggtttgaagcgttcgcacaat
ccgcgtatcaaggcgtttgcccagatcctgatggacgccggcatcgtgaccaccatccgc
aaaacccgtggcgacgatatcgacgccgcctgcggccagttggccggtgaggtcaaggat
cgcacccgggtgcaggagcgcatgcagaaaatggccgaataccagaacaagttcggcaag
gattttggccgcatcgtggagatctccgggtga
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