Herbaspirillum seropedicae SmR1: Hsero_2956
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Entry
Hsero_2956 CDS
T01268
Symbol
ndk
Name
(GenBank) nucleoside-diphosphate kinase protein
KO
K00940
nucleoside-diphosphate kinase [EC:
2.7.4.6
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00230
Purine metabolism
hse00240
Pyrimidine metabolism
hse01100
Metabolic pathways
hse01110
Biosynthesis of secondary metabolites
hse01232
Nucleotide metabolism
hse01240
Biosynthesis of cofactors
Module
hse_M00049
Adenine ribonucleotide biosynthesis, IMP => ADP,ATP
hse_M00050
Guanine ribonucleotide biosynthesis, IMP => GDP,GTP
hse_M00052
Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
hse_M00053
Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
hse_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Hsero_2956 (ndk)
00240 Pyrimidine metabolism
Hsero_2956 (ndk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hse04131
]
Hsero_2956 (ndk)
Enzymes [BR:
hse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.6 nucleoside-diphosphate kinase
Hsero_2956 (ndk)
Membrane trafficking [BR:
hse04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
Hsero_2956 (ndk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NDK
DUF3553
Motif
Other DBs
NCBI-ProteinID:
ADJ64444
UniProt:
D8IZV4
LinkDB
All DBs
Position
complement(3364111..3364536)
Genome browser
AA seq
141 aa
AA seq
DB search
MAIERTLSIIKPDAVAKNVIGQIYTRFENAGLKVIAARMAQLSRAEAEGFYAVHRERPFF
KDLVDFMVSGPVMIQVLEGEGAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSD
ADETAKVEIAYFFPALNVYSR
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggcaattgaacgcaccctgtcgatcatcaagcccgacgccgtcgccaagaacgtgatc
ggccagatctacacccgtttcgaaaacgctggcctgaaggtcatcgccgcccgcatggca
caactgtcgcgcgctgaggcagaaggcttctacgccgtgcaccgcgagcgtcctttcttc
aaggatctggtggacttcatggtttccggcccggtcatgatccaggtgctggaaggcgaa
ggcgcgatcctgaagaaccgcgacctgatgggcgctaccgatccgaagaaggccgagaag
ggcaccatccgtgccgacttcgctgactccatcgacgccaacgccgtgcacggttcggac
gctgatgagaccgccaaggtcgaaatcgcctacttcttcccggcgctgaacgtctattcg
cgttaa
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