Herbaspirillum seropedicae SmR1: Hsero_2972
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Entry
Hsero_2972 CDS
T01268
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase Fe-S subunit protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00020
Citrate cycle (TCA cycle)
hse00190
Oxidative phosphorylation
hse00650
Butanoate metabolism
hse00720
Other carbon fixation pathways
hse01100
Metabolic pathways
hse01110
Biosynthesis of secondary metabolites
hse01120
Microbial metabolism in diverse environments
hse01200
Carbon metabolism
Module
hse_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hse_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hse_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Hsero_2972 (sdhB)
00650 Butanoate metabolism
Hsero_2972 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
Hsero_2972 (sdhB)
00720 Other carbon fixation pathways
Hsero_2972 (sdhB)
Enzymes [BR:
hse01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Hsero_2972 (sdhB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_9
Fer4_18
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
ADJ64460
UniProt:
D8IZX0
LinkDB
All DBs
Position
complement(3384903..3385613)
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AA seq
236 aa
AA seq
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MTRTLKFKIYRYDPDKDDKPYMQDLTVELKPTDKMLLDALQRIKSDVDDSLALRRSCREG
VCGSDAMNINGKNGLACITNLNELTEPIVLKPLPGLPVIRDLIVDMTNFFKQYDSIKPYL
INDSIPPEKERLQSPEQREELDGVYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFI
ADSRDEATGARLDNLEDPYRLFRCRSIMNCVDVCPKGLNPNKAIGKIKELMVRRSV
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcaccctgaaattcaagatctaccgttacgatccggacaaggacgacaagccg
tacatgcaagacctgacggtggaactgaagcccaccgacaagatgctgctggacgccctg
caacgcatcaagtccgacgtcgacgattccctggcgctgcgccgctcctgccgcgaaggc
gtgtgcggttccgacgccatgaacatcaacggcaagaacggcctggcctgcatcaccaac
ctgaacgagctgaccgaacccatcgttctgaagccgctgcctggcctgccggtgatccgc
gacctgatcgtggacatgaccaacttcttcaagcagtacgactcgatcaagccctacctg
atcaacgacagcatcccgcccgagaaggagcgtctgcagtcgcccgagcaacgggaagag
ctggacggcgtctacgagtgcatcctgtgcgcctgctgctccacgtcctgcccgtcgttc
tggtggaatccggacaagttcgtcggcccggctggcctcttgcaagcctaccgcttcatc
gccgacagccgcgacgaagccaccggcgcgcgtctggacaacctggaagacccgtaccgc
ctgttccgttgccgttccatcatgaactgcgtcgatgtctgccccaagggtctgaacccc
aacaaggccatcggcaagatcaaggaactgatggtccgccgttcggtataa
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