Herbaspirillum seropedicae SmR1: Hsero_3027
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Entry
Hsero_3027 CDS
T01268
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00900
Terpenoid backbone biosynthesis
hse01100
Metabolic pathways
hse01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Hsero_3027 (ispF)
Enzymes [BR:
hse01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Hsero_3027 (ispF)
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Motif
Pfam:
YgbB
DUF2653
DUF6630
GerE
Motif
Other DBs
NCBI-ProteinID:
ADJ64515
UniProt:
D8J0F9
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All DBs
Position
3447451..3447954
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AA seq
167 aa
AA seq
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MSHPIAFRIGQGYDCHVLVEGRPLILGGVTIPHHKGLLGHSDADALLHAITDALFGAAAL
GDIGRHFPDTDPQFKGADSRVLLREAGKRLAAAGYRVGNVDATIIAQAPKMAPHIGAMVI
HIAEDLGISPQQVNVKAKTNEKMGFLGREEGIATEAVALIYRPDEGN
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccccattgccttccgtatcggccagggctatgactgtcacgtcctggtcgaa
ggccgtccgctgatcctgggcggcgtcaccatcccgcaccataagggcctgctgggccac
tcggacgccgacgccctgctgcacgccatcaccgacgccctcttcggcgcggccgcgctg
ggcgacatcggccgccatttccccgataccgacccgcaattcaagggcgccgattcccgc
gtgctgctgcgcgaagccggcaaacgcctggcggcggcgggctaccgggtgggcaatgtg
gacgccaccatcatcgcccaggcgcccaagatggccccgcatattggcgcaatggtgatc
cacattgccgaagacctcggaatttcccctcaacaagtcaacgtaaaggcgaaaaccaac
gaaaaaatgggatttttggggcgagaagaagggattgccaccgaagcagttgcactcatc
taccgcccagatgaaggaaattaa
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